RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SPANXN4Q5MJ08 99 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 TMEM198Q66K66 360 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 MIER2Q8N344 545 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 FBXW8Q8N3Y1 598 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 OR2M7Q8NG81 312 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 OR56A1Q8NGH5 318 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 OR4A15Q8NGL6 344 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 PSMA8Q8TAA3 256 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 SPPL2AQ8TCT8 520 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 SFXN5Q8TD22 340 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 SLC9A6Q92581 669 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 TMBIM1Q969X1 311 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 TMCO6Q96DC7 493 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 FAM120BQ96EK7 910 aaKnown RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 THOC1Q96FV9 657 aaKnown RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 CHMP6Q96FZ7 201 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 RILPQ96NA2 401 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 FRMD6Q96NE9 622 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 COL21A1Q96P44 957 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 MS4A4EQ96PG1 132 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 EBF4Q9BQW3 602 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 SIKE1Q9BRV8 207 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 LMF2Q9BU23 707 aaKnown RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 METTL7AQ9H8H3 244 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 NPHS2Q9NP85 383 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 SIRT3Q9NTG7 399 aaPredicted RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 FAM120CQ9NX05 1096 aaKnown RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 ZIM2Q9NZV7 527 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 NTMQ9P121 344 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 CBLCQ9ULV8 474 aa13.99□□□□□ -0.17
LITAF-217ENST00000575426 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
LITAF-217ENST00000575426 ANKUB1A6NFN9 424 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 OR6C70A6NIJ9 312 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 TFECO14948 347 aaPredicted RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 HS6ST1O60243 411 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 KCNH1O95259 989 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 PSMG1O95456 288 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 IL6P05231 212 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 KRT16P08779 473 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 ALOX5P09917 674 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 GABRA3P34903 492 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 DNASE1L1P49184 302 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 PNLIPRP2P54317 469 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 HBA1P69905 142 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 PSG6Q00889 435 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 GUCY1A3Q02108 690 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 EFR3AQ14156 821 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 DECR1Q16698 335 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 KRTCAP3Q53RY4 240 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 PRAMEF20Q5VT98 475 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 ZNF324BQ6AW86 544 aaPredicted RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 NPSR1Q6W5P4 371 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 WDR53Q7Z5U6 358 aaPredicted RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 SLC22A16Q86VW1 577 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 CLECL1Q8IZS7 167 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 ZFP62Q8NB50 900 aaPredicted RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 ST6GALNAC3Q8NDV1 305 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 GPR151Q8TDV0 419 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 JADE3Q92613 823 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 TEX37Q96LM6 180 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 OR52E6Q96RD3 313 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 DOHHQ9BU89 302 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 CXorf36Q9H7Y0 433 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 SH2D2AQ9NP31 389 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 DEPPQ9NTK1 212 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 SEC14L3Q9UDX4 400 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 DCTN4Q9UJW0 460 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 BOKQ9UMX3 212 aaPredicted RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.98□□□□□ -0.17
LITAF-217ENST00000575426 NBASA2RRP1 2371 aa13.98□□□□□ -0.17
LITAF-217ENST00000575426 ANKRD33BA6NCL7 494 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 NPIPA5E9PKD4 350 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 SOX30O94993 753 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 SNX4O95219 450 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 CBX6O95503 412 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 PGRP06401 933 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 GNLYP22749 145 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 MST1P26927 711 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 IL12AP29459 219 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 MDH1P40925 334 aaKnown RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 RFC3P40938 356 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 MASP1P48740 699 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 DGKQP52824 942 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 WNT3P56703 355 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 PPIAP62937 165 aaKnown RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 IRX1P78414 480 aaPredicted RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 KCNC4Q03721 635 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 RBPJQ06330 500 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 GAB1Q13480 694 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 PAOXQ6QHF9 649 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 GFRALQ6UXV0 394 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 PACS2Q86VP3 889 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 ANKRD46Q86W74 232 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 OR4N2Q8NGD1 307 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 SLC35A4Q96G79 324 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 JSRP1Q96MG2 331 aaPredicted RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 ADOQ96SZ5 270 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 SLX1AQ9BQ83 275 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms