RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CCT3P49368 545 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 MRPL19P49406 292 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 CDK9P50750 372 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 PRKAG1P54619 331 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 NME5P56597 212 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 UFM1P61960 85 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 MRPS22P82650 360 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 PLCXD2Q0VAA5 305 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SPDYE7PQ495Y7 208 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 CYP27C1Q4G0S4 372 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 TBCELQ5QJ74 424 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 OR4F3Q6IEY1 312 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 LYPD8Q6UX82 237 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 TMEM64Q6YI46 380 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 NUP54Q7Z3B4 507 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SLC44A2Q8IWA5 706 aaPredicted RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 SULF2Q8IWU5 870 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 MIER2Q8N344 545 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 CDRT4Q8N9R6 151 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SIMC1Q8NDZ2 872 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 OR56A1Q8NGH5 318 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SFXN5Q8TD22 340 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 PAQR8Q8TEZ7 354 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 OMA1Q96E52 524 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 RILPQ96NA2 401 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 EBF4Q9BQW3 602 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 LMF2Q9BU23 707 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 ANKRA2Q9H9E1 313 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 Q9N2J8 555 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SDR39U1Q9NRG7 319 aaPredicted RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 ZCCHC3Q9NUD5 404 aaKnown RBP10.16□□□□□ -0.78
CHD3-216ENST00000573936 TRIM33Q9UPN9 1127 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 OR10H1Q9Y4A9 318 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 SNX8Q9Y5X2 465 aa10.16□□□□□ -0.78
CHD3-216ENST00000573936 ESPL1Q14674 2120 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 A1L4Q6 167 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 REM1O75628 298 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PGRP06401 933 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 ABCB1P08183 1280 aaPredicted RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 KRT16P08779 473 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 CT45A8P0DMV1 189 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 CT45A9P0DMV2 189 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 EFNA1P20827 205 aaPredicted RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 IL12BP29460 328 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 MEOX1P50221 254 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 ATP4BP51164 291 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PNLIPRP2P54317 469 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PSMD4P55036 377 aaKnown RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 WNT3P56703 355 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PSG6Q00889 435 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 EFR3AQ14156 821 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 FAM174BQ3ZCQ3 159 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PRR30Q53SZ7 412 aaPredicted RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 CT45A2Q5DJT8 189 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 SPANXN4Q5MJ08 99 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 TMEM198Q66K66 360 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 GK5Q6ZS86 529 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 MSANTD1Q6ZTZ1 278 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 SZRD1Q7Z422 152 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 MDGA2Q7Z553 956 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 FBXW8Q8N3Y1 598 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 FAM13CQ8NE31 585 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 OR4A15Q8NGL6 344 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 GRHL3Q8TE85 626 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 NUDT8Q8WV74 236 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 FAR1Q8WVX9 515 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 TMCO6Q96DC7 493 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 FAM120BQ96EK7 910 aaKnown RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 THOC1Q96FV9 657 aaKnown RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 MARK4Q96L34 752 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 BARD1Q99728 777 aaKnown RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 FAM173AQ9BQD7 235 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 HES7Q9BYE0 225 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 RABEP2Q9H5N1 569 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 CXorf36Q9H7Y0 433 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 SH2D2AQ9NP31 389 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 SIRT3Q9NTG7 399 aaPredicted RBP10.15□□□□□ -0.78
CHD3-216ENST00000573936 MRGBPQ9NV56 204 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 ASF1BQ9NVP2 202 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 TMEM45AQ9NWC5 275 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 BTNL2Q9UIR0 455 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 DCTN4Q9UJW0 460 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 CBLCQ9ULV8 474 aa10.15□□□□□ -0.78
CHD3-216ENST00000573936 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 FAM234BA2RU67 622 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 ANKRD33BA6NCL7 494 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 OR6C70A6NIJ9 312 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 SCN2BO60939 215 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 KCNH1O95259 989 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 ALOX5P09917 674 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 UQCRC2P22695 453 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 IL12AP29459 219 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 GABRA3P34903 492 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 SOAT1P35610 550 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 POLR2JP52435 117 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms