RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TRIM8Q9BZR9 551 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF700Q9H0M5 742 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR51I1Q9H343 314 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MMADHCQ9H3L0 296 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRIM45Q9H8W5 580 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ANKRA2Q9H9E1 313 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 FOLH1BQ9HBA9 442 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC6A13Q9NSD5 602 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 P4HTMQ9NXG6 502 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TAS2R1Q9NYW7 299 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CALML5Q9NZT1 146 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLAMF8Q9P0V8 285 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ABI3Q9P2A4 366 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ABCD2Q9UBJ2 740 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 IL17BQ9UHF5 180 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MAGEL2Q9UJ55 1249 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MRTO4Q9UKD2 239 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLDN16Q9Y5I7 305 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 HEMK1Q9Y5R4 338 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CABIN1Q9Y6J0 2220 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ARID1BQ8NFD5 2236 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ANKRD12Q6UB98 2062 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 A0A1W2PQ72 361 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CFAP73A6NFT4 308 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 FRG2CA6NGY1 282 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 HRKO00198 91 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 NME4O00746 187 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SOCS6O14544 535 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC28A2O43868 658 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 HS6ST1O60243 411 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZFAND5O76080 213 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 PSMG1O95456 288 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 DDAH2O95865 285 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CBX7O95931 251 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 IGKV3-11P04433 115 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RPLP1P05386 114 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 NR2F1P10589 423 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ETFAP13804 333 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 HOXB9P17482 250 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ME2P23368 584 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 F8A1P23610 371 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ITGA3P26006 1051 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCGF2P35227 344 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CPOXP36551 454 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 EFNA3P52797 238 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CRISP3P54108 245 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 UCNP55089 124 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CASP9P55211 416 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC37A1P57057 533 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 POU6F2P78424 691 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RBBP4Q09028 425 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDC20Q12834 499 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SCARB2Q14108 478 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SELPLGQ14242 412 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 MYBPC3Q14896 1274 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 EBPQ15125 230 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 DECR1Q16698 335 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF630Q2M218 657 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPAT3Q53EU6 434 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RNFT1Q5M7Z0 435 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 DCST2Q5T1A1 773 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 FHL5Q5TD97 284 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 C1orf146Q5VVC0 180 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 KIRREL2Q6UWL6 708 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SERPINA11Q86U17 422 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 KRT73Q86Y46 540 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 C9orf40Q8IXQ3 194 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ULK2Q8IYT8 1036 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 HORMAD2Q8N7B1 307 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RNF148Q8N7C7 305 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR8K3Q8NH51 312 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 C16orf52Q8NHV5 167 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 FBXO27Q8NI29 283 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 M1APQ8TC57 530 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 MIPOL1Q8TD10 442 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF721Q8TF20 911 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 XAGE5Q8WWM1 108 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 THAP4Q8WY91 577 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDS1Q92903 461 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM162AQ96A26 154 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM125Q96AQ2 219 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC7A6OSQ96CW6 309 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 OTUB1Q96FW1 271 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RMND5BQ96G75 393 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 REXO5Q96IC2 774 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 BTBD9Q96Q07 612 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR7D2Q96RA2 312 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 CCNL2Q96S94 520 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 STACQ99469 402 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 MDFIQ99750 246 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPATCH1Q9BRR8 931 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 NUDT9Q9BW91 350 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ITPAQ9BY32 194 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 WWTR1Q9GZV5 400 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 MUC13Q9H3R2 512 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 IKZF5Q9H5V7 419 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 PIF1Q9H611 641 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 KAT8Q9H7Z6 458 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 DUSP22Q9NRW4 184 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms