RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ATP6V1HQ9UI12 483 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 UTS2RQ9UKP6 389 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 CES1P1Q9UKY3 287 aa13.35□□□□□ -0.27
COMMD4-225ENST00000569245 SPTBN1Q01082 2364 aaKnown RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 A0A1W2PP18 115 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 FAM166BA8MTA8 275 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 BBIP1A8MTZ0 92 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 ACOT7O00154 380 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 NR5A2O00482 541 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 ZNHIT1O43257 154 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 AKAP10O43572 662 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 HNRNPCL1O60812 293 aaKnown RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 PDE9AO76083 593 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 LRATO95237 230 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 CT62P0C5K7 136 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 DDCP20711 480 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 CAPN3P20807 821 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 NR0B1P51843 470 aaKnown RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 MNAT1P51948 309 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 FUT7Q11130 342 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 EBPQ15125 230 aaKnown RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 C3AR1Q16581 482 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 ZNF791Q3KP31 576 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 SLC22A10Q63ZE4 541 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 HIST2H2BCQ6DN03 193 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 MTFR2Q6P444 385 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 VWA5B2Q8N398 1253 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 ADCY4Q8NFM4 1077 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 OR2M7Q8NG81 312 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 OR8J2Q8NGG1 315 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 COQ8BQ96D53 544 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 SPACA9Q96E40 222 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 PRPF18Q99633 342 aaKnown RBP13.34□□□□□ -0.27
COMMD4-225ENST00000569245 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 GIMAP4Q9NUV9 329 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 NDUFAF1Q9Y375 327 aa13.34□□□□□ -0.27
COMMD4-225ENST00000569245 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 A0A1W2PRS3 328 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CCDC154A6NI56 674 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 PRRG2O14669 202 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CFLARO15519 480 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 NADKO95544 446 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CLDN1O95832 211 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CLPSP04118 112 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 PGRP06401 933 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 FBXO45P0C2W1 286 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CCL3P10147 92 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 DDX5P17844 614 aaKnown RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 S100A3P33764 101 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 NRG3P56975 720 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 FAM174BQ3ZCQ3 159 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 SPANXN4Q5MJ08 99 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CPTPQ5TA50 214 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 FAM111BQ6SJ93 734 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 BNC2Q6ZN30 1099 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 SLC22A16Q86VW1 577 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 DND1Q8IYX4 353 aaKnown RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 LRRC25Q8N386 305 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 NUDT8Q8WV74 236 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 GFM2Q969S9 779 aaKnown RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 EXOSC8Q96B26 276 aaKnown RBP13.33□□□□□ -0.28
COMMD4-225ENST00000569245 TAS2R7Q9NYW3 318 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 ENTPD4Q9Y227 616 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
COMMD4-225ENST00000569245 CROCCQ5TZA2 2017 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 C9JVG2 144 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 FBP2O00757 339 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ANGPT2O15123 496 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ATP1B1P05026 303 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 PTGS2P35354 604 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 PIGAP37287 484 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 DNASE1L1P49184 302 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 DGKQP52824 942 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 KCNJ2P63252 427 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 PHC1P78364 1004 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 MAP4K2Q12851 820 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 EXOSC7Q15024 291 aaKnown RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 CMPK2Q5EBM0 449 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 CCDC116Q8IYX3 515 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 SAMD14Q8IZD0 417 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 DPP10Q8N608 796 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF615Q8N8J6 731 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 OR7A2PQ8NGA2 310 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 OR10G3Q8NGC4 313 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms