RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 MC3RP41968 323 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 CDK9P50750 372 aaKnown RBP18.55■□□□□ 0.56
CLK3-225ENST00000569063 NUP107P57740 925 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 SH2D4BQ5SQS7 431 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 RTL6Q6ICC9 239 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 TMEM107Q6UX40 140 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 DDIASQ8IXT1 998 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 OR2L13Q8N349 312 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 OR1J4Q8NGS1 313 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 LILRB4Q8NHJ6 448 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 TMCO6Q96DC7 493 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 ELP4Q96EB1 424 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 OSBPL11Q9BXB4 747 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 RNF6Q9Y252 685 aa18.55■□□□□ 0.56
CLK3-225ENST00000569063 C19orf84I3L1E1 186 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 UPK1AO00322 258 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 PIP5K1BO14986 540 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 RGS16O15492 202 aaPredicted RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 CTIFO43310 598 aaKnown RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 REM1O75628 298 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 TRAPPC6AO75865 159 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 PSMG1O95456 288 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 CHRNB4P30926 498 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 ARRB2P32121 409 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 PTGER4P35408 488 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 TRPC1P48995 793 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 PNLIPRP2P54317 469 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 RPL38P63173 70 aaKnown RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 PSG6Q00889 435 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 ANGPTL8Q6UXH0 198 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 B3GNT6Q6ZMB0 384 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 SLC44A2Q8IWA5 706 aaPredicted RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 GFM2Q969S9 779 aaKnown RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 ADOQ96SZ5 270 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 REEP4Q9H6H4 257 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 GALNT9Q9HCQ5 603 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 SSU72Q9NP77 194 aaKnown RBP18.54■□□□□ 0.56
CLK3-225ENST00000569063 KLRF1Q9NZS2 232 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 DNAJC13O75165 2243 aa18.54■□□□□ 0.56
CLK3-225ENST00000569063 PRAMEF25A6NGN4 478 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 GNB5O14775 395 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 SNPHO15079 494 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 GLI4P10075 376 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 PRF1P14222 555 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 COX6B1P14854 86 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 KRT20P35900 424 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 PDE7AQ13946 482 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 EFR3AQ14156 821 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 GALNTL6Q49A17 601 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 XKR7Q5GH72 579 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 NHSL2Q5HYW2 709 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 EXOC3L1Q86VI1 746 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 OR4N2Q8NGD1 307 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 RNF138Q8WVD3 245 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 TSSK3Q96PN8 268 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 DDX18Q9NVP1 670 aaKnown RBP18.53■□□□□ 0.56
CLK3-225ENST00000569063 BAIAP2L1Q9UHR4 511 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 ZDHHC2Q9UIJ5 367 aa18.53■□□□□ 0.56
CLK3-225ENST00000569063 PCNX1Q96RV3 2341 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 PHF3Q92576 2039 aaKnown RBP18.52■□□□□ 0.56
CLK3-225ENST00000569063 C15orf38-AP3S2A0A0A6YYH1 394 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 C2orf72A6NCS6 295 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 IL12BP29460 328 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 FRKP42685 505 aaPredicted RBP18.52■□□□□ 0.56
CLK3-225ENST00000569063 KIR3DL1P43629 444 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 ASMTP46597 345 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 SERPINB4P48594 390 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 CRYZQ08257 329 aaKnown RBP18.52■□□□□ 0.56
CLK3-225ENST00000569063 ZNF155Q12901 538 aaPredicted RBP18.52■□□□□ 0.56
CLK3-225ENST00000569063 CYP27C1Q4G0S4 372 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 TNFAIP8L3Q5GJ75 292 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 C1orf185Q5T7R7 199 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 LARP4Q71RC2 724 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLK3-225ENST00000569063 NUDCD3Q8IVD9 361 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 MCEMP1Q8IX19 187 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 ULK2Q8IYT8 1036 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 WDSUB1Q8N9V3 476 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 ACBD4Q8NC06 268 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 AGR3Q8TD06 166 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 PPCDCQ96CD2 204 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 MTERF3Q96E29 417 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 PPP3R2Q96LZ3 170 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 TIMP4Q99727 224 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 ALKBH4Q9NXW9 302 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 OR10H1Q9Y4A9 318 aa18.52■□□□□ 0.56
CLK3-225ENST00000569063 AHRRA9YTQ3 701 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 PDPK1O15530 556 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 AKAP10O43572 662 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 CBR3O75828 277 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 BCKDHAP12694 445 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 MRPS22P82650 360 aaKnown RBP18.51■□□□□ 0.55
CLK3-225ENST00000569063 TOMM20Q15388 145 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 ZNF385BQ569K4 471 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 VASNQ6EMK4 673 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 ANKRD26P1Q6NSI1 321 aa18.51■□□□□ 0.55
CLK3-225ENST00000569063 ZNF551Q7Z340 670 aaPredicted RBP18.51■□□□□ 0.55
CLK3-225ENST00000569063 CCDC71Q8IV32 467 aaPredicted RBP18.51■□□□□ 0.55
CLK3-225ENST00000569063 FAM83FQ8NEG4 500 aaPredicted RBP18.51■□□□□ 0.55
CLK3-225ENST00000569063 CIDECQ96AQ7 238 aaPredicted RBP18.51■□□□□ 0.55
CLK3-225ENST00000569063 SPOCK3Q9BQ16 436 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms