RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TNFRSF21O75509 655 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 CBX7O95931 251 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 F12P00748 615 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 THBDP07204 575 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 GRK2P25098 689 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 PPICP45877 212 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 NEK2P51955 445 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 GPX6P59796 221 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 RPS4XP62701 263 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 MGAT2Q10469 447 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 RAET1LQ5VY80 246 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 OR5M10Q6IEU7 315 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 SLC48A1Q6P1K1 146 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 FAM111BQ6SJ93 734 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 RAPH1Q70E73 1250 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 ZBED8Q8IZ13 594 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 OR4K17Q8NGC6 315 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 OR52R1Q8NGF1 315 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 WDR20Q8TBZ3 569 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 SLC35A4Q96G79 324 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 PINK1Q9BXM7 581 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 A0A087X1B8 175 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 UQCRHLA0A096LP55 91 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 C1orf226A1L170 272 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 TP73O15350 636 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 CD5LO43866 347 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 GUCY1B2O75343 617 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 REM1O75628 298 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 ALDOAP04075 364 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 KLK1P06870 262 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 LTA4HP09960 611 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 MTHFD2P13995 350 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 CSNK2A2P19784 350 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 KRT20P35900 424 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 FEN1P39748 380 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PIK3CGP48736 1102 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 MAPK12P53778 367 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 DR1Q01658 176 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 EFR3AQ14156 821 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PON3Q15166 354 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 GUSBP1Q15486 140 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 EXOC3L2Q2M3D2 409 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 CHRFAM7AQ494W8 412 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 FAM214BQ7L5A3 538 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PAGE2Q7Z2X7 111 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 GAS2L3Q86XJ1 694 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 L3MBTL4Q8NA19 623 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 FNDC9Q8TBE3 224 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PYROXD1Q8WU10 500 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 TRMT61AQ96FX7 289 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PLPPR2Q96GM1 343 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 ADOQ96SZ5 270 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 TMEM204Q9BSN7 226 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 AHSPQ9NZD4 102 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 CES1P1Q9UKY3 287 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 SNX12Q9UMY4 172 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 LAMP3Q9UQV4 416 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 GPR55Q9Y2T6 319 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 PCDHA9Q9Y5H5 950 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 EXPH5Q8NEV8 1989 aa10.62□□□□□ -0.71
GTF3C1-209ENST00000568569 TCRBV9S1A1TA0A576 114 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 B4DXG7 233 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 H0YC42 278 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 LINC01387J3KSC0 135 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 SEC14L5O43304 696 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 ERAL1O75616 437 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 PLAUP00749 431 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 FCGR2AP12318 317 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 GFAPP14136 432 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 CRABP2P29373 138 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 IL12BP29460 328 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 SSTR1P30872 391 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 SPRP35270 261 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 IDUAP35475 653 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 EMDP50402 254 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 ALDH18A1P54886 795 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 TPD52P55327 224 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 CLDN15P56746 228 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 PSPHP78330 225 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 DLG1Q12959 904 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 GTF2H2Q13888 395 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 SLMAPQ14BN4 828 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 CCNYL2Q5T2Q4 361 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 C10orf62Q5T681 223 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 GTF2H2CQ6P1K8 395 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 GOLGA7Q7Z5G4 137 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 LRRC8AQ8IWT6 810 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 RNF138Q8WVD3 245 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 AKAP1Q92667 903 aaKnown RBP eCLIP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 GFM2Q969S9 779 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms