RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CXXC5Q7LFL8 322 aaKnown RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 BTLAQ7Z6A9 289 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 TSEN54Q7Z6J9 526 aaKnown RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 IQCHQ86VS3 1027 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 YAF2Q8IY57 180 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 RDH10Q8IZV5 341 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 HDDC3Q8N4P3 179 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 MS4A15Q8N5U1 240 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 NAT16Q8N8M0 369 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 POGLUT1Q8NBL1 392 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 VANGL1Q8TAA9 524 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 SLC7A13Q8TCU3 470 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 GPR151Q8TDV0 419 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 CREB3L4Q8TEY5 395 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 PHYHIPQ92561 330 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 GAL3ST3Q96A11 431 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 CREB3L1Q96BA8 519 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 RNFT2Q96EX2 444 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 RIPOR3Q96MK2 946 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 CMTM3Q96MX0 182 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 OR5M11Q96RB7 305 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 F2RL3Q96RI0 385 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 ARHGDIGQ99819 225 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 ACTR6Q9GZN1 396 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 RNF121Q9H920 327 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 TRIM36Q9NQ86 728 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 INIPQ9NRY2 104 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 RBFOX1Q9NWB1 397 aaKnown RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 GDE1Q9NZC3 331 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 OR6C2Q9NZP2 312 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 DNAJC27Q9NZQ0 273 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 PTGFRNQ9P2B2 879 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 TESQ9UGI8 421 aaKnown RBP7.19□□□□□ -1.26
ATXN3-250ENST00000568290 SCML1Q9UN30 329 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 SNX11Q9Y5W9 270 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 WNT6Q9Y6F9 365 aa7.19□□□□□ -1.26
ATXN3-250ENST00000568290 FAM240BA0A1B0GVZ2 78 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 A0A1W2PQL4 384 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 BLACEA4D250 179 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 LRIT2A6NDA9 550 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ANKRD61A6NGH8 418 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 J3KTA2 159 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 SGK494L7N484 410 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 MAN2B1O00754 1011 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 CTDSP2O14595 271 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 POLR1CO15160 346 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 SLC43A1O75387 559 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 KCNK2O95069 426 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 HLA-DQB1P01920 261 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GBAP04062 536 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 APODP05090 189 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 SERPIND1P05546 499 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 EPHX1P07099 455 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 DBIP07108 87 aaKnown RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GUSBP08236 651 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 HOXC4P09017 264 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GSTT2P0CG29 244 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GSTT2BP0CG30 244 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GJA1P17302 382 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 TNFRSF1BP20333 461 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 HIST1H1TP22492 207 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 MMP11P24347 488 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ACSL1P33121 698 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 NR4A2P43354 598 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 RGS8P57771 180 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 BTG1P62324 171 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 RPS21P63220 83 aaKnown RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 CSNK1G2P78368 415 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 HNRNPA0Q13151 305 aaKnown RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 CDK10Q15131 360 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 MPEG1Q2M385 716 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 TCTN1Q2MV58 587 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 FAM214AQ32MH5 1076 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ATAT1Q5SQI0 421 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ZNF648Q5T619 568 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 LIPKQ5VXJ0 399 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 THOC7Q6I9Y2 204 aaKnown RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 SLC48A1Q6P1K1 146 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 PSRC1Q6PGN9 363 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 CD200R1LQ6Q8B3 271 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 Q6ZPB1 254 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 MBOAT2Q6ZWT7 520 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ZNF767PQ75MW2 155 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 HDDC2Q7Z4H3 204 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 LUZP2Q86TE4 346 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 LRRC28Q86X40 367 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-250ENST00000568290 LIX1LQ8IVB5 337 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 TCTE3Q8IZS6 198 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 MFSD9Q8NBP5 474 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 DUSP18Q8NEJ0 188 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 NUP43Q8NFH3 380 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 GPR32P1Q8NGA4 272 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 OR5AR1Q8NGP9 310 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ZFPM2Q8WW38 1151 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 ASB12Q8WXK4 309 aa7.18□□□□□ -1.26
ATXN3-250ENST00000568290 THRSPQ92748 146 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms