RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 UBQLN3Q9H347 655 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 GSTO2Q9H4Y5 243 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FOLH1BQ9HBA9 442 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 FETUBQ9UGM5 382 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FOXD3Q9UJU5 478 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 DKKL1Q9UK85 242 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FBXL2Q9UKC9 423 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 MRTO4Q9UKD2 239 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 L3MBTL1Q9Y468 752 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 POLR3HQ9Y535 204 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 BSNQ9UPA5 3926 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FLNCQ14315 2725 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 SERTM1A2A2V5 107 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 MBD3L3A6NE82 208 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 A6NNC1 897 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 H3BQF6 201 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 SLC28A1O00337 649 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 COPEO14579 308 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 SCO2O43819 266 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GMFGO60234 142 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 ZIC3O60481 467 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 TSPAN2O60636 221 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 COQ9O75208 318 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GLRA3O75311 464 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 RCBTB2O95199 551 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PROCP04070 461 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 SHBGP04278 402 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CT45A8P0DMV1 189 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CT45A9P0DMV2 189 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 UROSP10746 265 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CD1EP15812 388 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 KRT4P19013 534 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 HK1P19367 917 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DNASE1P24855 282 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DPP4P27487 766 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 NTSP30990 170 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 SRD5A2P31213 254 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GABRA3P34903 492 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CRHR1P34998 444 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GPC1P35052 558 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PTGDSP41222 190 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GSTM5P46439 218 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CPA2P48052 419 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 ZNF136P52737 540 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 NAA20P61599 178 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 ZNF155Q12901 538 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 FOXF2Q12947 444 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GAB1Q13480 694 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DECR1Q16698 335 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PRSS53Q2L4Q9 553 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CYP27C1Q4G0S4 372 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CT45A2Q5DJT8 189 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DCST1Q5T197 706 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 NOXRED1Q6NXP6 359 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 TMEM81Q6P7N7 255 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 TMEM107Q6UX40 140 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PLXDC2Q6UX71 529 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 TRIM46Q7Z4K8 759 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 P4HA3Q7Z4N8 544 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 LUZP2Q86TE4 346 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 MARCH3Q86UD3 253 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 CDC20BQ86Y33 519 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GSPT2Q8IYD1 628 aaKnown RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 UBQLNLQ8IYU4 475 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 C9orf106Q8NAJ2 232 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 RELL2Q8NC24 303 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 OR7G2Q8NG99 324 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 MBD3L2Q8NHZ7 208 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 DUSP19Q8WTR2 217 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 FAM222BQ8WU58 562 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 WNT2BQ93097 391 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 ERP27Q96DN0 273 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 VSTM2LQ96N03 204 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 BTBD9Q96Q07 612 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 YIPF4Q9BSR8 244 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 RBM24Q9BX46 236 aaKnown RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 STMN4Q9H169 189 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 C12orf65Q9H3J6 166 aaKnown RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 LIME1Q9H400 295 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DSN1Q9H410 356 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PTGES2Q9H7Z7 377 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 Q9N2J8 555 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 RASSF1Q9NS23 344 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 DDX18Q9NVP1 670 aaKnown RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 SIRT5Q9NXA8 310 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 MED11Q9P086 117 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 PPP4R1LQ9P1A2 415 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 EMCNQ9ULC0 261 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 FIS1Q9Y3D6 152 aa5.83□□□□□ -1.48
TCF4-228ENST00000565393 USP9XQ93008 2570 aaPredicted RBP5.83□□□□□ -1.48
TCF4-228ENST00000565393 PTPN13Q12923 2485 aa5.82□□□□□ -1.48
TCF4-228ENST00000565393 CLCA1A8K7I4 914 aa5.82□□□□□ -1.48
TCF4-228ENST00000565393 MYO1GB0I1T2 1018 aa5.82□□□□□ -1.48
TCF4-228ENST00000565393 UPK1AO00322 258 aa5.82□□□□□ -1.48
TCF4-228ENST00000565393 PLOD2O00469 737 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms