RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NR4A3Q92570 626 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 KAT2AQ92830 837 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 RAB8BQ92930 207 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 TMBIM1Q969X1 311 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 ANKRD9Q96BM1 317 aaPredicted RBP9.06□□□□□ -0.96
UBFD1-202ENST00000563366 CTHRC1Q96CG8 243 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 NRBF2Q96F24 287 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 MAGED4Q96JG8 741 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 CNDP2Q96KP4 475 aaKnown RBP9.06□□□□□ -0.96
UBFD1-202ENST00000563366 ART5Q96L15 291 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 OR7D2Q96RA2 312 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 NR1H4Q96RI1 486 aaPredicted RBP9.06□□□□□ -0.96
UBFD1-202ENST00000563366 PRRX2Q99811 253 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 TREX2Q9BQ50 279 aaPredicted RBP9.06□□□□□ -0.96
UBFD1-202ENST00000563366 PIGUQ9H490 435 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 SYNDIG1Q9H7V2 258 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 COQ10BQ9H8M1 238 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 EVA1AQ9H8M9 152 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 REEP1Q9H902 201 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 MKKSQ9NPJ1 570 aaPredicted RBP9.06□□□□□ -0.96
UBFD1-202ENST00000563366 POLE3Q9NRF9 147 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 DUSP22Q9NRW4 184 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 MAT2BQ9NZL9 334 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 SEC14L3Q9UDX4 400 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 FTSJ1Q9UET6 329 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 RARRES3Q9UL19 164 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 ORC6Q9Y5N6 252 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 SDK1Q7Z5N4 2213 aa9.06□□□□□ -0.96
UBFD1-202ENST00000563366 SCN2AQ99250 2005 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SAC3D1A6NKF1 404 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 PRR33A8MZF0 331 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 DENRO43583 198 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 PRAMEF2O60811 474 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 MT-ND1P03886 318 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CTSBP07858 339 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CYC1P08574 325 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 ALOX5P09917 674 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 MYF5P13349 255 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 NID1P14543 1247 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 DNAJA1P31689 397 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CSTF2P33240 577 aaKnown RBP eCLIP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 MAN2A2P49641 1150 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 ALDH3A2P51648 485 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SNRPNP63162 240 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 KCNJ10P78508 379 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 MRPS35P82673 323 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 IL11RAQ14626 422 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 LPAL2Q16609 132 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 NKG7Q16617 165 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 FHL5Q5TD97 284 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 ARHGAP40Q5TG30 622 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 FAM111BQ6SJ93 734 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 VTCN1Q7Z7D3 282 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CYP4Z1Q86W10 505 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 PPP1R3BQ86XI6 285 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 OR4N5Q8IXE1 308 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 GALNT4Q8N4A0 578 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CBR4Q8N4T8 237 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 TMEM52Q8NDY8 209 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 OR5D16Q8NGK9 328 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 RIT1Q92963 219 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 TAMM41Q96BW9 452 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 GIMAP5Q96F15 307 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF354BQ96LW1 612 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CCDC74BQ96LY2 380 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 EPYCQ99645 322 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 RBM4BQ9BQ04 359 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 RBM4Q9BWF3 364 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 ALOXE3Q9BYJ1 711 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SERHL2Q9H4I8 314 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CXorf21Q9HAI6 301 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 EQTNQ9NQ60 294 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 C14orf105Q9NVL8 296 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 KLHL28Q9NXS3 571 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SMPD3Q9NY59 655 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 USE1Q9NZ43 259 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 AKAP7Q9P0M2 348 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 C3orf18Q9UK00 162 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SLC13A4Q9UKG4 626 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 CFL2Q9Y281 166 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 SLC9A8Q9Y2E8 581 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 FAM32AQ9Y421 112 aaKnown RBP9.05□□□□□ -0.96
UBFD1-202ENST00000563366 DSPPQ9NZW4 1301 aa9.05□□□□□ -0.96
UBFD1-202ENST00000563366 LAMA1P25391 3075 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 A0A1W2PS29 197 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 LNP1A1A4G5 178 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 FAM227AF5H4B4 570 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 TMX2-CTNND1H3BSU7 103 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SYT5O00445 386 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 NTN3O00634 580 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SOCS2O14508 198 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 EI24O14681 340 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 FOXD2O60548 495 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms