RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZFAND2BQ8WV99 257 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM168AQ92567 244 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 HTRA1Q92743 480 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ESAMQ96AP7 390 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 PTCD3Q96EY7 689 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 EGFL8Q99944 293 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CACNG6Q9BXT2 260 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 C12orf65Q9H3J6 166 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ALG2Q9H553 416 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CISD1Q9NZ45 108 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 MOCS1Q9NZB8 636 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 EHD3Q9NZN3 535 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 PHF11Q9UIL8 331 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CLEC4AQ9UMR7 237 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF281Q9Y2X9 895 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 VWA7Q9Y334 891 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF337Q9Y3M9 751 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 EPN1Q9Y6I3 576 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CAPN6Q9Y6Q1 641 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 A0A0A6YYD5 115 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 SYCE3A1L190 88 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 OR2M5A3KFT3 312 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 OR6C70A6NIJ9 312 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 SEC14L5O43304 696 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 HNF1AP20823 631 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 BUD31P41223 144 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 DSCR4P56555 118 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 EEFSECP57772 596 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 C21orf58P58505 322 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 MGAT2Q10469 447 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 CR1LQ2VPA4 569 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 FBXO48Q5FWF7 155 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 SEL1L2Q5TEA6 688 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 FIGNL1Q6PIW4 674 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GGNQ86UU5 652 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 LAS2Q8IYD9 372 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GABRG1Q8N1C3 465 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 FADS6Q8N9I5 356 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 MCUQ8NE86 351 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 STEAP2Q8NFT2 490 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 OR7G1Q8NGA0 311 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 ANKRD49Q8WVL7 239 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 SLC35A4Q96G79 324 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GMPPAQ96IJ6 420 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 TACO1Q9BSH4 297 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 SOX7Q9BT81 388 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 EFCAB11Q9BUY7 163 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 CAPS2Q9BXY5 557 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 ITPAQ9BY32 194 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 OR51B5Q9H339 312 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 PLAC1Q9HBJ0 212 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 DNAJC11Q9NVH1 559 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 ASIC3Q9UHC3 531 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF639Q9UID6 485 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 DKKL1Q9UK85 242 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA8QA0A0J9YX86 632 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA8OA6NCC3 632 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA8NF8WBI6 632 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA8MH3BSY2 632 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 H7C417 338 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA8RI6L899 631 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 CLGNO14967 610 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 PGRMC2O15173 223 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TO15178 435 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 ACOX3O15254 700 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 KIAA0513O60268 411 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 DLX3O60479 287 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TSPAN2O60636 221 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 EEDO75530 441 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 ALDOAP04075 364 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 FCGR2AP12318 317 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GRK2P25098 689 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TLX1P31314 330 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TTKP33981 857 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 BSGP35613 385 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 DEKP35659 375 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 HSPA7P48741 367 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 NEK2P51955 445 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 SARNPP82979 210 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 IRF9Q00978 393 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 PLCXD2Q0VAA5 305 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 LAPTM5Q13571 262 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF460Q14592 562 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 CRYMQ14894 314 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 P2RY6Q15077 328 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TGFBIQ15582 683 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TSNQ15631 228 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TRIP13Q15645 432 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 TBCCQ15814 346 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 PRICKLE4Q2TBC4 344 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 AGAP6Q5VW22 663 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM45BPQ6NSW5 357 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms