RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 H3BMH7 237 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 IFRD1O00458 451 aaPredicted RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 HCRTR1O43613 425 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 CSO75390 466 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 C2P06681 752 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 PROS1P07225 676 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ANKRD34CP0C6C1 535 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 IMPA1P29218 277 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ALDH4A1P30038 563 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 DCTDP32321 178 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 SPRP35270 261 aaPredicted RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 SLC26A3P40879 764 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 HTR3AP46098 478 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 RAB28P51157 221 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 KPNA2P52292 529 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 GALNT1Q10472 559 aaPredicted RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 ILF2Q12905 390 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 PRKG2Q13237 762 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 FASTKQ14296 549 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 TMED2Q15363 201 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR4D1Q15615 310 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ZIC1Q15915 447 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TTLL9Q3SXZ7 439 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TNFAIP8L3Q5GJ75 292 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 BEND6Q5SZJ8 279 aaPredicted RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 MBOAT1Q6ZNC8 495 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TIFABQ6ZNK6 161 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 PRSS42Q7Z5A4 293 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ISCA2Q86U28 154 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 AMIGO1Q86WK6 493 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 KLHDC8AQ8IYD2 350 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 IQCKQ8N0W5 287 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 SPATA6LQ8N4H0 392 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR4E2Q8NGC2 313 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR4D9Q8NGE8 314 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR2A1Q8NGT9 310 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR2L8Q8NGY9 312 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 RAD51AP1Q96B01 352 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 LINGO1Q96FE5 620 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 SLC41A2Q96JW4 573 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 OR2A14Q96R47 310 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ATOH8Q96SQ7 321 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TMEM109Q9BVC6 243 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 SPRY4Q9C004 299 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 DERL2Q9GZP9 239 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 CCDC68Q9H2F9 335 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TCF7L2Q9NQB0 619 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 HRASLS2Q9NWW9 162 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 SPATA7Q9P0W8 599 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 CIDEBQ9UHD4 219 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 POLG2Q9UHN1 485 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 TRMT6Q9UJA5 497 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 POMT2Q9UKY4 750 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 ASF1AQ9Y294 204 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 NEUROG3Q9Y4Z2 214 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 KLK4Q9Y5K2 254 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 COLEC10Q9Y6Z7 277 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 LAMA5O15230 3695 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 UNC13CQ8NB66 2214 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 A0A096LPK6 155 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 EXOC1LA0A1B0GW35 172 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 A0A1W2PPM1 405 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 OR6C74A6NCV1 312 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TRIM49D1C9J1S8 452 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TOX3O15405 576 aaPredicted RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 TAPBPO15533 448 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 DUX1O43812 170 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 ZBTB14O43829 449 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 KLK8O60259 260 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 KLHL2O95198 593 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SLC16A8O95907 504 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 C8GP07360 202 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CCDC166P0CW27 439 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CCL4P13236 92 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 H2AFXP16104 143 aaPredicted RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 UGT2B7P16662 529 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 STMN1P16949 149 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 EPORP19235 508 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 POLR2CP19387 275 aaPredicted RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 SAT1P21673 171 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CNTFP26441 200 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 PSMB5P28074 263 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CRABP2P29373 138 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 PRDX3P30048 256 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 SHMT2P34897 504 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 GGT5P36269 586 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SERPINF1P36955 418 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 ETV5P41161 510 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 MSH2P43246 934 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 GPR12P47775 334 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SLC6A12P48065 614 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SERPINB9P50453 376 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CDKL1Q00532 357 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TRA2AQ13595 282 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMG1-206ENST00000562668 ARHGAP19Q14CB8 494 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms