RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TRMT5Q32P41 509 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 CLEC6AQ6EIG7 209 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 GTF2H2CQ6P1K8 395 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 LYPD8Q6UX82 237 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 RNF111Q6ZNA4 994 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 TMEM200AQ86VY9 491 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 SNX32Q86XE0 403 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 LRRC25Q8N386 305 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 RBM15BQ8NDT2 890 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 TUBGCP3Q96CW5 907 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF597Q96LX8 424 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 WWTR1Q9GZV5 400 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 EXO5Q9H790 373 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ACTR8Q9H981 624 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 EFCAB1Q9HAE3 211 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ZFP64Q9NPA5 681 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 BBIP1A8MTZ0 92 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 OR10H2O60403 315 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 SEMA3DO95025 777 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 GPR75O95800 540 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 IDO1P14902 403 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 PCSK2P16519 638 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 TSPAN8P19075 237 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 PIGAP37287 484 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 SLC37A1P57057 533 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 ERVK-8P63133 956 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 MYBPHQ13203 477 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 NTRK2Q16620 822 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 MMEL1Q495T6 779 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 OR52E8Q6IFG1 317 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 MRM1Q6IN84 353 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 CYP20A1Q6UW02 462 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 GOLGA7Q7Z5G4 137 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 NUDT13Q86X67 352 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 OR4N5Q8IXE1 308 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 TAGAPQ8N103 731 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 LIX1Q8N485 282 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 GAL3ST4Q96RP7 486 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 MTERF1Q99551 399 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 SORBS1Q9BX66 1292 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF385DQ9H6B1 395 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 DDX31Q9H8H2 851 aaKnown RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 ERVK-19Q9WJR5 959 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 DNAJC15Q9Y5T4 150 aa12.47□□□□□ -0.41
SMAD3-214ENST00000560402 CHCHD2Q9Y6H1 151 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-214ENST00000560402 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 A0A0G2JNJ9 132 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 PROM1O43490 865 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 CELA3AP09093 270 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 ENDOUP21128 410 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NUDT2P50583 147 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 RPP38P78345 283 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 MAD2L1Q13257 205 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 ATP6AP1LQ52LC2 224 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 C10orf62Q5T681 223 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 PRAMEF20Q5VT98 475 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 C18orf63Q68DL7 685 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 OGFOD2Q6N063 350 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 RPS27LQ71UM5 84 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NET1Q7Z628 596 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 MILR1Q7Z6M3 343 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 MIER2Q8N344 545 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 L3MBTL4Q8NA19 623 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 PCYOX1LQ8NBM8 494 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 WDR20Q8TBZ3 569 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 METTL6Q8TCB7 284 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 RIT1Q92963 219 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NINJ1Q92982 152 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 PPWD1Q96BP3 646 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 LRRC46Q96FV0 321 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NSUN5Q96P11 429 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 SECISBP2Q96T21 854 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 THTPAQ9BU02 230 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 DOHHQ9BU89 302 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF717Q9BY31 904 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NOL11Q9H8H0 719 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 IPPKQ9H8X2 491 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 Q9UFV3 132 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms