RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TMEM19Q96HH6 336 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 WACQ9BTA9 647 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 DISC1C4P0D8 188 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 VNN2O95498 520 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 UEVLDQ8IX04 471 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ARL14Q8N4G2 192 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 FBXL20Q96IG2 436 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 NUDT15Q9NV35 164 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 NSG1A0A0A6YYJ2 146 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 MAGEA12P43365 314 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 HK3P52790 923 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 LETMD1Q6P1Q0 360 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ACBD7Q8N6N7 88 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 CDRT4Q8N9R6 151 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 CD200R1Q8TD46 325 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 CIDECQ96AQ7 238 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 L3HYPDHQ96EM0 354 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 A0A0A6YYC8 382 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 I3L1I5 382 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 M0R129 80 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 C18orf21Q32NC0 220 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 MINDY1Q8N5J2 469 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF709Q8N972 641 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 OR52N2Q8NGI0 321 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 FCAMRQ8WWV6 532 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 PPP1R14BQ96C90 147 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 LAMP1P11279 417 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF12P17014 697 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 PYCR1P32322 319 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 MC3RP41968 323 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 MAZP56270 477 aaKnown RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 FXYD6P3P58550 94 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SLC18B1Q6NT16 456 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 LCTLQ6UWM7 567 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SLC30A2Q9BRI3 323 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SLAMF7Q9NQ25 335 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ICKQ9UPZ9 632 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 A0A0U1RQS6 177 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 OXSR1O95747 527 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ATF6P18850 670 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ERVK-19Q9WJR5 959 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ADAM18Q9Y3Q7 739 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 CLIC3O95833 236 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SLC6A8P48029 635 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 KLHDC9Q8NEP7 349 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ULBP3Q9BZM4 244 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 KCMF1Q9P0J7 381 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 YPEL5P62699 121 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 FRKP42685 505 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 RBPJQ06330 500 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 DCAF12Q5T6F0 453 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 PIANPQ8IYJ0 282 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 PRR22Q8IZ63 422 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 AGBL5Q8NDL9 886 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 GPR150Q8NGU9 434 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 LRR1Q96L50 414 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF334Q9HCZ1 680 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 A0A1B0GVC2 190 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 WASH4PA8MWX3 477 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 LDB3O75112 727 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 HOXD9P28356 352 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-208ENST00000560371 MELKQ14680 651 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ENPP6Q6UWR7 440 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 SLC45A3Q96JT2 553 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 TMEM185BQ9H7F4 350 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 EURLQ9NYK6 297 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF224Q9NZL3 707 aa12.76□□□□□ -0.37
TRAF3-208ENST00000560371 TRAPPC13A5PLN9 417 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 J3QRK9 145 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 AURKAO14965 403 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 UBL4AP11441 157 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 F3P13726 295 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 GNRHRP30968 328 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 NFATC4Q14934 902 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF675Q8TD23 568 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 RTP4Q96DX8 246 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CACNA1GO43497 2377 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms