RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 DKKL1Q9UK85 242 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 LIPT1Q9Y234 373 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 MAGED1Q9Y5V3 778 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 CCNT2O60583 730 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 ABCB7O75027 752 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PIAS1O75925 651 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 WISP3O95389 354 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PEPDP12955 493 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 ECHS1P30084 290 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 BSGP35613 385 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 ARL4CP56559 192 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PDIA2Q13087 525 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 OR4D1Q15615 310 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 OR5M10Q6IEU7 315 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 GPSM1Q86YR5 675 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PDIK1LQ8N165 341 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 FBXO36Q8NEA4 188 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 FBXO25Q8TCJ0 367 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 PINK1Q9BXM7 581 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 DERL2Q9GZP9 239 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 WDR41Q9HAD4 459 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 LYARQ9NX58 379 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-213ENST00000560127 IGHV4-30-2A0A087WSY4 118 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 ACOX3O15254 700 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 TNFRSF21O75509 655 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 NT5EP21589 574 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 DPP4P27487 766 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 PIK3R1P27986 724 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 ARFIP1P53367 373 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 GPX6P59796 221 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 CKAP4Q07065 602 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 MGAT2Q10469 447 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 FRG1Q14331 258 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 FAM214BQ7L5A3 538 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 LRRC70Q7Z2Q7 622 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 NEUROG1Q92886 237 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 FBXW5Q969U6 566 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 LRRC39Q96DD0 335 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 LCORQ96JN0 433 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 MTERF1Q99551 399 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 CENPKQ9BS16 269 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 CD244Q9BZW8 370 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 MOCS1Q9NZB8 636 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 CD274Q9NZQ7 290 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 GDF2Q9UK05 429 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 ZNF175Q9Y473 711 aa11.49□□□□□ -0.57
RABGGTA-213ENST00000560127 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 C17orf51A8MQB3 221 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 AQP8O94778 261 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 EPB42P16452 691 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 PIK3CBP42338 1070 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 XKP51811 444 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 GUCY2DQ02846 1103 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 ZNF844Q08AG5 666 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 EXOSC7Q15024 291 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 PON3Q15166 354 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 GRHL2Q6ISB3 625 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 FAM111BQ6SJ93 734 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 CYP20A1Q6UW02 462 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 ZBED8Q8IZ13 594 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 ACTR6Q9GZN1 396 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 LRTM1Q9HBL6 345 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 POPDC3Q9HBV1 291 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 SAYSD1Q9NPB0 183 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 CFL2Q9Y281 166 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
RABGGTA-213ENST00000560127 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 TO15178 435 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 SEC14L5O43304 696 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 CD8AP01732 235 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 GBAP04062 536 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 CPMP14384 443 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 CD1DP15813 335 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 GRK2P25098 689 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 SSTR1P30872 391 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 NEK2P51955 445 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 GAS1P54826 345 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 PLTPP55058 493 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 EEFSECP57772 596 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 VLDLRP98155 873 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 FAPQ12884 760 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms