RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ETV4P43268 484 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 KIR3DL1P43629 444 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 TRPC1P48995 793 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 CDK9P50750 372 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 CORO7P57737 925 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 NUP107P57740 925 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 RPP38P78345 283 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 PMPCAQ10713 525 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 ARL13AQ5H913 290 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 TIGD3Q6B0B8 471 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 ZNF585AQ6P3V2 769 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 IKBIPQ70UQ0 350 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 FAM9CQ8IZT9 166 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 ACBD4Q8NC06 268 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 OR6Y1Q8NGX8 325 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 LILRB4Q8NHJ6 448 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 NEIL3Q8TAT5 605 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 TMBIM1Q969X1 311 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 SARAFQ96BY9 339 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 TMEM41AQ96HV5 264 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 ZNF597Q96LX8 424 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 IQCGQ9H095 443 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 GLIPR2Q9H4G4 154 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 FOLH1BQ9HBA9 442 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 LRTM1Q9HBL6 345 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 RAB21Q9UL25 225 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 FIS1Q9Y3D6 152 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 TRAF6Q9Y4K3 522 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 FAM215AQ9Y5M1 114 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 DNAJC15Q9Y5T4 150 aa8.03□□□□□ -1.12
SNRPA1-206ENST00000558059 AKAP6Q13023 2319 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 CCDC168Q8NDH2 2452 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 OR6C70A6NIJ9 312 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 FIGNL2A6NMB9 653 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ESPNB1AK53 854 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 GNB5O14775 395 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 LSM1O15116 133 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 RGS14O43566 566 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 TSPAN2O60636 221 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 TBX19O60806 448 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ICOSLGO75144 302 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ERN1O75460 977 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 REM1O75628 298 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 TRAPPC6AO75865 159 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 PSMG1O95456 288 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 HPNP05981 417 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 BPGMP07738 259 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 GLI4P10075 376 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 NEFHP12036 1026 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 SDC1P18827 310 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 GDF1P27539 372 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 PTPN6P29350 595 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 MC3RP41968 323 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 MASP1P48740 699 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 NCBP2P52298 156 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF844Q08AG5 666 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 SNTA1Q13424 505 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 RFTN2Q52LD8 501 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 WLSQ5T9L3 541 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 CES4AQ5XG92 561 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 SLC30A6Q6NXT4 461 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ZCCHC23Q6ZST2 131 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 CCDC71Q8IV32 467 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 CLYBLQ8N0X4 340 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 OR4N2Q8NGD1 307 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 CA5BP1Q8WTZ4 195 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 RNF138Q8WVD3 245 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ASB5Q8WWX0 329 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 RND1Q92730 232 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 GFM2Q969S9 779 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ELP4Q96EB1 424 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 SLC35A4Q96G79 324 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 AMDHD1Q96NU7 426 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 COL21A1Q96P44 957 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 TTYH2Q9BSA4 534 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 STMN4Q9H169 189 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 EXO5Q9H790 373 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 METTL7AQ9H8H3 244 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 GALNT9Q9HCQ5 603 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 MIEF1Q9NQG6 463 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 COQ3Q9NZJ6 369 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 B4GALT7Q9UBV7 327 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 BAIAP2L1Q9UHR4 511 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ZDHHC2Q9UIJ5 367 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 C19orf53Q9UNZ5 99 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 RNF6Q9Y252 685 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 C15orf41Q9Y2V0 281 aa8.02□□□□□ -1.13
SNRPA1-206ENST00000558059 ABCA4P78363 2273 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ANKHD1Q8IWZ3 2542 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PRAMEF25A6NGN4 478 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 UPK1AO00322 258 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PIP5K1BO14986 540 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 AKAP10O43572 662 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 WDR1O75083 606 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SLITRK5O94991 958 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CHEK2O96017 543 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms