RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 BMP7P18075 431 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PGAM1P18669 254 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GNAZP19086 355 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GSTM2P28161 218 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GDF5P43026 501 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 MSH2P43246 934 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CPA2P48052 419 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF75DP51815 510 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 IRX1P78414 480 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 IGLV3-21P80748 117 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CBX1P83916 185 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ARF1P84077 181 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 IRF9Q00978 393 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TBL3Q12788 808 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 FOXF2Q12947 444 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 RCN2Q14257 317 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TIGD6Q17RP2 521 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 EIPR1Q53HC9 387 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 NHSL2Q5HYW2 709 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 EXOSC6Q5RKV6 272 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 FNDC7Q5VTL7 733 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 VASNQ6EMK4 673 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TTC27Q6P3X3 843 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TRIM40Q6P9F5 258 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PRSS57Q6UWY2 283 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TMEM64Q6YI46 380 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF793Q6ZN11 406 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 DGAT2L6Q6ZPD8 337 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 UBE3DQ7Z6J8 389 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 LUZP2Q86TE4 346 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CPOQ8IVL8 374 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CNTN4Q8IWV2 1026 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 OR4N5Q8IXE1 308 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PM20D2Q8IYS1 436 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 RNF10Q8N5U6 811 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 SLC15A4Q8N697 577 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GABPB2Q8TAK5 448 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 MGARPQ8TDB4 240 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ADAMTS15Q8TE58 950 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 DOK4Q8TEW6 326 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PIGTQ969N2 578 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ISL2Q96A47 359 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PPWD1Q96BP3 646 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 WDYHV1Q96HA8 205 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF597Q96LX8 424 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 RILPQ96NA2 401 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 F2RL3Q96RI0 385 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GAL3ST4Q96RP7 486 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CCL19Q99731 98 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 UGT2B28Q9BY64 529 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 UBQLN3Q9H347 655 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ZMAT4Q9H898 229 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CALHM2Q9HA72 323 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 LYRM4Q9HD34 91 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 PRDM7Q9NQW5 492 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 KRT84Q9NSB2 600 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CNIH4Q9P003 139 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 C6orf203Q9P0P8 240 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 GUCA1BQ9UMX6 200 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 EIF3LQ9Y262 564 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TESMINQ9Y4I5 508 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CUBNO60494 3623 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 MED12Q93074 2177 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 FREM3P0C091 2139 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 DOCK7Q96N67 2140 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 NINQ8N4C6 2090 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ANKDD1BA6NHY2 528 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CCDC154A6NI56 674 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 RNF212BA8MTL3 300 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 DEFB108AA8MXU0 73 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 RTCAO00442 366 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CES2O00748 559 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CASKO14936 926 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PHGDHO43175 533 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PRAMEF4O60810 478 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 BANF1O75531 89 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 HPNP05981 417 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF37AP17032 561 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CD22P20273 847 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ATP5A1P25705 553 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 HPDP32754 393 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SLCO1A2P46721 670 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SLC6A12P48065 614 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 KCNC1P48547 511 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CDK9P50750 372 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 NAGLUP54802 743 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 VAMP2P63027 116 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CDKL1Q00532 357 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SCARB2Q14108 478 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 EBPQ15125 230 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 RPS6KA2Q15349 733 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.562e-8■■■■■ 30.9
VPS33B-207ENST00000557470 NTRK2Q16620 822 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 CT83Q5H943 113 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PRAMEF9Q5VWM5 478 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 MBNL2Q5VZF2 373 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PLXDC2Q6UX71 529 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms