RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CLNKQ7Z7G1 428 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 ZC3HC1Q86WB0 502 aaKnown RBP8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 ULK2Q8IYT8 1036 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 FBXW8Q8N3Y1 598 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 ACOT4Q8N9L9 421 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 FAM47BQ8NA70 645 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 RELL2Q8NC24 303 aaPredicted RBP8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 NEIL3Q8TAT5 605 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 ACTRT1Q8TDG2 376 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 SLCO2A1Q92959 643 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 F2RL3Q96RI0 385 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 NAP1L3Q99457 506 aaPredicted RBP8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 WDR83Q9BRX9 315 aaKnown RBP8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 TBCDQ9BTW9 1192 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 LDAHQ9H6V9 325 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 PLEKHF2Q9H8W4 249 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 ALKBH4Q9NXW9 302 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 PLEKHA6Q9Y2H5 1048 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 TEX264Q9Y6I9 313 aa8.19□□□□□ -1.1
GTF2A1-204ENST00000556268 NINQ8N4C6 2090 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 A0A1W2PR48 441 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 LRRC3CA6NJW4 275 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 LDB3O75112 727 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TRIM3O75382 744 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 WDR47O94967 919 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 SLPIP03973 132 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 EPORP19235 508 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TNNI3P19429 210 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 CD22P20273 847 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 CERS1P27544 350 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ELK3P41970 407 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 STT3AP46977 705 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ASCL1P50553 236 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 NRG3P56975 720 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TGM3Q08188 693 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TGFBIQ15582 683 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TBCCQ15814 346 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 LSM12Q3MHD2 195 aaKnown RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 FLYWCH1Q4VC44 716 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ADNP2Q6IQ32 1131 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TRIM40Q6P9F5 258 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ZNF793Q6ZN11 406 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ADAMTSL2Q86TH1 951 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 BIVMQ86UB2 503 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 GLB1L2Q8IW92 636 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 DND1Q8IYX4 353 aaKnown RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 NAXEQ8NCW5 288 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 SRFBP1Q8NEF9 429 aaKnown RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TNIP2Q8NFZ5 429 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 GOT1L1Q8NHS2 421 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 GRK7Q8WTQ7 553 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 SPACA9Q96E40 222 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 RMND5BQ96G75 393 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 TIMP4Q99727 224 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 MAPKAP1Q9BPZ7 522 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ROGDIQ9GZN7 287 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 ZNF703Q9H7S9 590 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 PPANQ9NQ55 473 aaKnown RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 CNIH4Q9P003 139 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 JKAMPQ9P055 326 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 PTBP2Q9UKA9 531 aaKnown RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 PSAT1Q9Y617 370 aa8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 CHCHD2Q9Y6H1 151 aaPredicted RBP8.18□□□□□ -1.1
GTF2A1-204ENST00000556268 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 KDM4EB2RXH2 506 aaPredicted RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 TP73O15350 636 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 ULK1O75385 1050 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 LPLP06858 475 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 HIST1H1TP22492 207 aaPredicted RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 UQCRC1P31930 480 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 MASP1P48740 699 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DGKQP52824 942 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 LTBQ06643 244 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DOC2AQ14183 400 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 NTRK2Q16620 822 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DEFB113Q30KQ7 82 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 ACSF3Q4G176 576 aaPredicted RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 TMEM35AQ53FP2 167 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 CT83Q5H943 113 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 NHSL2Q5HYW2 709 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 SULT1C3Q6IMI6 304 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 PAMR1Q6UXH9 720 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DGAT2L6Q6ZPD8 337 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 LRRC8AQ8IWT6 810 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 C9orf40Q8IXQ3 194 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 LAS2Q8IYD9 372 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 TCAIMQ8N3R3 496 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 BBOF1Q8ND07 529 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 WFDC11Q8NEX6 87 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 ZNF473Q8WTR7 871 aaKnown RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 CHAC2Q8WUX2 184 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 CCT6BQ92526 530 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 ARSGQ96EG1 525 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 PTCD3Q96EY7 689 aaKnown RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 RBM18Q96H35 190 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms