RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ZCCHC3Q9NUD5 404 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 DDX18Q9NVP1 670 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 GPATCH2Q9NW75 528 aa10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 C19orf25Q9UFG5 118 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 C19orf53Q9UNZ5 99 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 POLHQ9Y253 713 aa10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 SNX8Q9Y5X2 465 aa10.89□□□□□ -0.67
MTHFD1-211ENST00000555709 IGHV3-20A0A0C4DH32 117 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SAGE2PA6NJ88 616 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 NME4O00746 187 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SOCS6O14544 535 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 EMC8O43402 210 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 COX6A1P12074 109 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SSTR4P31391 388 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 RASSF2P50749 326 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SLC7A2P52569 658 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 MTPNP58546 118 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 PRR5P85299 388 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 PCOLCEQ15113 449 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SPDYE7PQ495Y7 208 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 DNAL1Q4LDG9 190 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 CPEB2Q7Z5Q1 589 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SLC15A3Q8IY34 581 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 DEFB107AQ8IZN7 70 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 C10orf111Q8N326 155 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 NFAM1Q8NET5 270 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 SLC2A12Q8TD20 617 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 ADAMTS17Q8TE56 1095 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 HOXB13Q92826 284 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 C8orf44Q96CB5 159 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 MS4A4EQ96PG1 132 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 CNPPD1Q9BV87 410 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 ANKRA2Q9H9E1 313 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 CMTM6Q9NX76 183 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 TMEM181Q9P2C4 612 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 ERVK-19Q9WJR5 959 aa10.88□□□□□ -0.67
MTHFD1-211ENST00000555709 PKDREJQ9NTG1 2253 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 IGHV1-45A0A0A0MS14 117 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 A8MUA0 341 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 CLIC1O00299 241 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 GYG2O15488 501 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 GPX2P18283 190 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 PPIBP23284 216 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 CHI3L1P36222 383 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 GPR143P51810 404 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 PGDP52209 483 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 EEF1A2Q05639 463 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 TP53BP2Q13625 1128 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 SSPNQ14714 243 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 EXOSC7Q15024 291 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 C6orf163Q5TEZ5 329 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 MFSD12Q6NUT3 480 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 BHLHB9Q6PI77 547 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 KIRREL2Q6UWL6 708 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 BNC2Q6ZN30 1099 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 C6orf120Q7Z4R8 191 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 MRGPREQ86SM8 312 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 RNF130Q86XS8 419 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 ZNF321PQ8N8H1 164 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 ZNF615Q8N8J6 731 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 MORN4Q8NDC4 146 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 NUP43Q8NFH3 380 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 OR7G1Q8NGA0 311 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 OR11G2Q8NGC1 345 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 OR52R1Q8NGF1 315 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 OR52N2Q8NGI0 321 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 PNPT1Q8TCS8 783 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 MIPOL1Q8TD10 442 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 ZNF721Q8TF20 911 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 DAZLQ92904 295 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 NACC2Q96BF6 587 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 SENP5Q96HI0 755 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 MAGED4Q96JG8 741 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 ZNF700Q9H0M5 742 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 KAT8Q9H7Z6 458 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 C3orf14Q9HBI5 128 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 LUZP4Q9P127 313 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 CLCA3PQ9Y6N3 262 aa10.87□□□□□ -0.67
MTHFD1-211ENST00000555709 DYRK3O43781 588 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 PRAMEF2O60811 474 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 COQ9O75208 318 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 SEC24DO94855 1032 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 KRT75O95678 551 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 HMGN2P05204 90 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 BMP2P12643 396 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 TNNI3P19429 210 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 OTX2P32243 289 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 MAP3K8P41279 467 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 MAGEA8P43361 318 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 MAN2A2P49641 1150 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 EMDP50402 254 aa10.86□□□□□ -0.67
MTHFD1-211ENST00000555709 GZMMP51124 257 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms