RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 NUBPLQ8TB37 319 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 DOK4Q8TEW6 326 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 ZNF721Q8TF20 911 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 UBE2E3Q969T4 207 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 PPWD1Q96BP3 646 aaKnown RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 RBM18Q96H35 190 aaKnown RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 SENP5Q96HI0 755 aaPredicted RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 DOHHQ9BU89 302 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 GATA5Q9BWX5 397 aaPredicted RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 SLC6A15Q9H2J7 730 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 LIME1Q9H400 295 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 ZNF703Q9H7S9 590 aaPredicted RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 POPDC3Q9HBV1 291 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 ZFP64Q9NPA5 681 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 CRIM1Q9NZV1 1036 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 SPRR3Q9UBC9 169 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 ZNF490Q9ULM2 529 aaPredicted RBP8.13□□□□□ -1.11
TDP1-208ENST00000553989 SPG11Q96JI7 2443 aa8.13□□□□□ -1.11
TDP1-208ENST00000553989 MTORP42345 2549 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 LOC100653049A0A140TA62 436 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 H0YJX3 145 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TAPBPO15533 448 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 SUPT3HO75486 399 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TRAPPC6AO75865 159 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 KRT34O76011 436 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TBX6O95947 436 aaPredicted RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 UQCRBP14927 111 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 CD1DP15813 335 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 STMN1P16949 149 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 CD22P20273 847 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ENDOUP21128 410 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 ATP5F1P24539 256 aaPredicted RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 TLX1P31314 330 aaPredicted RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 HSPA13P48723 471 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 MASP1P48740 699 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ASCL1P50553 236 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 RAB10P61026 200 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ATP6V0D1P61421 351 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 HERVK_113P63132 956 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ERVK-8P63133 956 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 SLAMF1Q13291 335 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 DYNC1I2Q13409 638 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 CUL3Q13618 768 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TOMM20Q15388 145 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ADRM1Q16186 407 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 FAM83EQ2M2I3 478 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 HYAL4Q2M3T9 481 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TMEM35AQ53FP2 167 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 PIGGQ5H8A4 983 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 MED27Q6P2C8 311 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 KLC3Q6P597 504 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 RNF111Q6ZNA4 994 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 LRRC70Q7Z2Q7 622 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 SLC22A9Q8IVM8 553 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 DEFB107AQ8IZN7 70 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ST13P4Q8IZP2 240 aaPredicted RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 ICA1LQ8NDH6 482 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ADCY4Q8NFM4 1077 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 OR10G3Q8NGC4 313 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 CEP70Q8NHQ1 597 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 NEIL3Q8TAT5 605 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 SLC26A7Q8TE54 656 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ANKRD9Q96BM1 317 aaPredicted RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 ZNF597Q96LX8 424 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 TRMOQ9BU70 441 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ERVK-6Q9BXR3 956 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 MS4A8Q9BY19 250 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 MRPL46Q9H2W6 279 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 OR51B5Q9H339 312 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 RPF2Q9H7B2 306 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 DMRT3Q9NQL9 472 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 RASSF1Q9NS23 344 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 MS4A12Q9NXJ0 267 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 PHF11Q9UIL8 331 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 CNOT11Q9UKZ1 510 aaKnown RBP8.12□□□□□ -1.11
TDP1-208ENST00000553989 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 POMPQ9Y244 141 aa8.12□□□□□ -1.11
TDP1-208ENST00000553989 ZFHX3Q15911 3703 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 FAM221AA4D161 298 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 A6NNC1 897 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 HRKO00198 91 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PRAMEF4O60810 478 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PRKRAO75569 313 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 IL2RAP01589 272 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 LYNP07948 512 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ME2P23368 584 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 TACR1P25103 407 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PIK3R1P27986 724 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 SERPINB1P30740 379 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 GGT5P36269 586 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 BUD31P41223 144 aaPredicted RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 WNT3P56703 355 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PHEXP78562 749 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 TRAP1Q12931 704 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 FOXD4Q12950 439 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms