RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 NANOGQ9H9S0 305 aa9.28□□□□□ -0.92
LETMD1-234ENST00000552645 TCF7L2Q9NQB0 619 aa9.28□□□□□ -0.92
LETMD1-234ENST00000552645 CCL27Q9Y4X3 112 aa9.28□□□□□ -0.92
LETMD1-234ENST00000552645 CLCA3PQ9Y6N3 262 aa9.28□□□□□ -0.92
LETMD1-234ENST00000552645 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
LETMD1-234ENST00000552645 A0A1W2PS29 197 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 C1orf226A1L170 272 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 SAGE2PA6NJ88 616 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 C17orf105B2RV13 164 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 AIM2O14862 343 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 GPR75O95800 540 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PRR35P0CG20 571 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ITGAMP11215 1152 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ICAM2P13598 275 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 COX7A2P14406 83 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ENDOUP21128 410 aaKnown RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 TCEA1P23193 301 aaKnown RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 HPCAL1P37235 193 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 SLC26A5P58743 744 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 C2orf80Q0P641 193 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 SELENBP1Q13228 472 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 SERTAD2Q14140 314 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ZNF750Q32MQ0 723 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 TIGD2Q4W5G0 525 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ZNF786Q8N393 782 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PARP8Q8N3A8 854 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 FNDC5Q8NAU1 212 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 GOLM1Q8NBJ4 401 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 OR4K14Q8NGD5 310 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 C9orf43Q8TAL5 461 aaPredicted RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 DNAJB14Q8TBM8 379 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 BRIX1Q8TDN6 353 aaKnown RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 EXOSC8Q96B26 276 aaKnown RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 RBM18Q96H35 190 aaKnown RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 MAGED4Q96JG8 741 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 IMMP1LQ96LU5 166 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PPP3R2Q96LZ3 170 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 TSSK3Q96PN8 268 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 WDR77Q9BQA1 342 aaPredicted RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 NUDT9Q9BW91 350 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 OR8D2Q9GZM6 311 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 LHPPQ9H008 270 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ADAP2Q9NPF8 381 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 MIEF1Q9NQG6 463 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 ARMC1Q9NVT9 282 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PTGFRNQ9P2B2 879 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.92
LETMD1-234ENST00000552645 UTS2RQ9UKP6 389 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PSME2Q9UL46 239 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 TP53TG5Q9Y2B4 290 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 PCDHA9Q9Y5H5 950 aa9.27□□□□□ -0.92
LETMD1-234ENST00000552645 NOTOA8MTQ0 251 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 K7EM74 188 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 PLOD2O00469 737 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 CLOCKO15516 846 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 IDH3BO43837 385 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 SEC14L2O76054 403 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 LRATO95237 230 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 KRT75O95678 551 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 ALPPP05187 535 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 SERPINA7P05543 415 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 TACR1P25103 407 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 PTGER1P34995 402 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 FEN1P39748 380 aaKnown RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 ST13P50502 369 aaKnown RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 HLCSP50747 726 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 XKP51811 444 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 TRA2BP62995 288 aaKnown RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 PLIN5Q00G26 463 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 TRIM25Q14258 630 aaKnown RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 HEPACAMQ14CZ8 416 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 SF3B4Q15427 424 aaKnown RBP eCLIP9.27□□□□□ -0.935e-7■■■□□ 17.5
LETMD1-234ENST00000552645 ELAVL1Q15717 326 aaKnown RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 EXT1Q16394 746 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 SLC36A3Q495N2 470 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 XKR7Q5GH72 579 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 MTX3Q5HYI7 312 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 FCRLBQ6BAA4 426 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 PLAG1Q6DJT9 500 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 PCSK4Q6UW60 755 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 LINC00696Q6ZRV3 163 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 ZBTB49Q6ZSB9 765 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 THAP3Q8WTV1 239 aaPredicted RBP9.27□□□□□ -0.93
LETMD1-234ENST00000552645 LRTOMTQ8WZ04 291 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 RCN3Q96D15 328 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 NRBF2Q96F24 287 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 VMP1Q96GC9 406 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 EGLN2Q96KS0 407 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 AGAP4Q96P64 663 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 ADI1Q9BV57 179 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 CNPPD1Q9BV87 410 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 HOXD1Q9GZZ0 328 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 RAD21L1Q9H4I0 556 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 SIAEQ9HAT2 523 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 VTI1BQ9UEU0 232 aa9.27□□□□□ -0.93
LETMD1-234ENST00000552645 CLDN16Q9Y5I7 305 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms