RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 C1QTNF7Q9BXJ2 289 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 MIS12Q9H081 205 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 CENPHQ9H3R5 247 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 DPEP2Q9H4A9 486 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 C5orf66Q9H5L9 145 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 DUSP22Q9NRW4 184 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 ZFP57Q9NU63 452 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 MIOXQ9UGB7 285 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 IKZF2Q9UKS7 526 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 NSG2Q9Y328 171 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 RAP2CQ9Y3L5 183 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 RIPK3Q9Y572 518 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 PCDHAC2Q9Y5I4 1007 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 KPTNQ9Y664 436 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 PCDH11YQ9BZA8 1340 aa5.71□□□□□ -1.5
VPS29-210ENST00000552130 HSPB6O14558 160 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 MT-CO3P00414 261 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 HPRP00739 348 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 MMP3P08254 477 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 NPSP0C0P6 89 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 HOXB8P17481 243 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 GTF2E2P29084 291 aaKnown RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 GNA11P29992 359 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 AHRP35869 848 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 CRYBB2P43320 205 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ACADSBP45954 432 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 PGGT1BP53609 377 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 CTSCP53634 463 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 EMP2P54851 167 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 PRPS1P60891 318 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 POLR2GP62487 172 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS29-210ENST00000552130 HERVK_113P63132 956 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 GABPAQ06546 454 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 GCKRQ14397 625 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 MRPL23Q16540 153 aaKnown RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 SPDYE7PQ495Y7 208 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SFT2D3Q587I9 215 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ZNF658Q5TYW1 1059 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 FAM69BQ5VUD6 431 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SLC22A10Q63ZE4 541 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 OR52W1Q6IF63 320 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 CDC42EP5Q6NZY7 148 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 FAM171BQ6P995 826 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 LEKR1Q6ZMV7 388 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 Q6ZRM9 215 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ARCQ7LC44 396 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 TRMT1LQ7Z2T5 733 aaKnown RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 MRPL21Q7Z2W9 205 aaKnown RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 PRIMA1Q86XR5 153 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 PLD3Q8IV08 490 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 LSMEM2Q8N112 164 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SPEM1Q8N4L4 309 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 PCDH20Q8N6Y1 951 aaKnown RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 MFSD9Q8NBP5 474 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SDR9C7Q8NEX9 313 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 HTR3CQ8WXA8 447 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SMPDL3AQ92484 453 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 TAAR8Q969N4 342 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 OPTNQ96CV9 577 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 P2RY11Q96G91 374 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ZNF578Q96N58 590 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 NDNQ99608 321 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 MED10Q9BTT4 135 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 CHID1Q9BWS9 393 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ERVK-6Q9BXR3 956 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ALOXE3Q9BYJ1 711 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 DRC3Q9H069 523 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ILKAPQ9H0C8 392 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 LRRN3Q9H3W5 708 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SLC52A3Q9NQ40 469 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 TUBA8Q9NY65 449 aaPredicted RBP5.7□□□□□ -1.5
VPS29-210ENST00000552130 SLC17A7Q9P2U7 560 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 SCML1Q9UN30 329 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 ADAMTS5Q9UNA0 930 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 STARD10Q9Y365 291 aa5.7□□□□□ -1.5
VPS29-210ENST00000552130 A0A1W2PQ72 361 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 MGAT4DA6NG13 374 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 OR5K4A6NMS3 321 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 VWC2LB2RUY7 222 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 B4DGG1 531 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 H3BTX0 84 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 GPR171O14626 319 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 LATO43561 262 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 OR2J3O76001 311 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 VTNP04004 478 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 STSP08842 583 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ALOX5P09917 674 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 UBTFL1P0CB47 393 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 GSTT2P0CG29 244 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 GSTT2BP0CG30 244 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 HSMCR30P0CW71 290 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CTSAP10619 480 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 UQCRBP14927 111 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 PCSK6P29122 969 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 MPLP40238 635 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 PSMD4P55036 377 aaKnown RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 NAAAQ02083 359 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms