RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 XPR1Q9UBH6 696 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 PRODH2Q9UF12 536 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 NDRG3Q9UGV2 375 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 GPR55Q9Y2T6 319 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-205ENST00000550013 WIF1Q9Y5W5 379 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 HEATR5AQ86XA9 2040 aa13.96□□□□□ -0.17
RAB5C-205ENST00000550013 DSCAMO60469 2012 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 PCNX3Q9H6A9 2034 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 ESYT3A0FGR9 886 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 HCRTR2O43614 444 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 SMNDC1O75940 238 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB5C-205ENST00000550013 LY6G6DO95868 133 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF708P17019 499 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 TSPAN8P19075 237 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 CORO7P57737 925 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 GAB1Q13480 694 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF628Q5EBL2 1059 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 C10orf62Q5T681 223 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-205ENST00000550013 VWA1Q6PCB0 445 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 AAGABQ6PD74 315 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
RAB5C-205ENST00000550013 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 SLC35A4Q96G79 324 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 WFIKKN1Q96NZ8 548 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 ADOQ96SZ5 270 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 KLHL28Q9NXS3 571 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 HEY2Q9UBP5 337 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 DKKL1Q9UK85 242 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 PSME2Q9UL46 239 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 ROS1P08922 2347 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 CSPG4Q6UVK1 2322 aa13.95□□□□□ -0.18
RAB5C-205ENST00000550013 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 H7C1Q1 480 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CTIFO43310 598 aaKnown RBP13.94□□□□□ -0.18
RAB5C-205ENST00000550013 ZIC3O60481 467 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 TSPAN2O60636 221 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 SMPD2O60906 423 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 SMIM24O75264 130 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 RPS17P08708 135 aaKnown RBP13.94□□□□□ -0.18
RAB5C-205ENST00000550013 RBP1P09455 135 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CHMP24386 653 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 GRK2P25098 689 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 MAGEA12P43365 314 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CDH13P55290 713 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 B3GALT5-AS1P59052 145 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 NPSR1Q6W5P4 371 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 P4HA3Q7Z4N8 544 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF483Q8TF39 744 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-205ENST00000550013 SELENOMQ8WWX9 145 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 KAT2AQ92830 837 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 COX4I2Q96KJ9 171 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 BTBD9Q96Q07 612 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 FAIM2Q9BWQ8 316 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 NINJ2Q9NZG7 142 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 UTS2RQ9UKP6 389 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 DLGAP4Q9Y2H0 992 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF780BQ9Y6R6 833 aa13.94□□□□□ -0.18
RAB5C-205ENST00000550013 MSTNO14793 375 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 ESRRBO95718 433 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 CTAGE8P0CG41 777 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 DPP4P27487 766 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 GAS1P54826 345 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 EEF1A1P68104 462 aaKnown RBP13.93□□□□□ -0.18
RAB5C-205ENST00000550013 SLC7A5Q01650 507 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 TCHHL1Q5QJ38 904 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-205ENST00000550013 EEF1A1P5Q5VTE0 462 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 SCIMPQ6UWF3 145 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAB5C-205ENST00000550013 TAOK1Q7L7X3 1001 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 BTLAQ7Z6A9 289 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 CTAGE4Q8IX94 777 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 UBQLNLQ8IYU4 475 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 CCDC116Q8IYX3 515 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 CNEP1R1Q8N9A8 125 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 OR9A2Q8NGT5 310 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF675Q8TD23 568 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 RNF138Q8WVD3 245 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 PIK3IP1Q96FE7 263 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 Q96MF0 132 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 VSTM2LQ96N03 204 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 FAM111AQ96PZ2 611 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 OPN3Q9H1Y3 402 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-205ENST00000550013 ACSS3Q9H6R3 686 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 UBTD1Q9HAC8 227 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 BRF2Q9HAW0 419 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 ZDHHC18Q9NUE0 388 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
RAB5C-205ENST00000550013 RAI1Q7Z5J4 1906 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms