RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RORCP51449 518 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 EPHA5P54756 1037 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 CDH11P55287 796 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF33BQ06732 778 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 C1orf61Q13536 156 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 FBXO43Q4G163 708 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 TRIM69Q86WT6 500 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 METTL27Q8N6F8 245 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM255BQ8WV15 326 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 MCHR1Q99705 422 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 ENOPH1Q9UHY7 261 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 A4GNTQ9UNA3 340 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 C17orf113A0A1B0GUU1 675 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 HRO43593 1189 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 APODP05090 189 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 GABRB1P18505 474 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 NOS3P29474 1203 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 MPIP34949 423 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC9A3P48764 834 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 KHKP50053 298 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 PDX1P52945 283 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 FAM111BQ6SJ93 734 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 IL20RBQ6UXL0 311 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 CRELD1Q96HD1 420 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 OR7D2Q96RA2 312 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 MND1Q9BWT6 205 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 KLHL28Q9NXS3 571 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 TBC1D29Q9UFV1 150 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 CACNB4O00305 520 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 OXSR1O95747 527 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PRR5P85299 388 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 AGBL4Q5VU57 503 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 MTFR2Q6P444 385 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 IKBIPQ70UQ0 350 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 FGF14Q92915 247 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 DPH1Q9BZG8 443 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 SEMA4GQ9NTN9 838 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 MARK1Q9P0L2 795 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 REV1Q9UBZ9 1251 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 ZFR2Q9UPR6 939 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 CENPVL1A0A0U1RR11 272 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 TSPAN11A1L157 253 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 LINC01565O15544 149 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PPP2CBP62714 309 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PPP2CAP67775 309 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 IL18Q14116 193 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 EXOSC7Q15024 291 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 C9orf50Q5SZB4 431 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PRSS41Q7RTY9 318 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 KLBQ86Z14 1044 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 RBM12BQ8IXT5 1001 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 TBC1D19Q8N5T2 526 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 OR5T3Q8NGG3 340 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 OR52I1Q8NGK6 324 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 SECISBP2Q96T21 854 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 C19orf43Q9BQ61 176 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 AICDAQ9GZX7 198 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC6A20Q9NP91 592 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 PTGFRNQ9P2B2 879 aa12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-209ENST00000548825 DVL2O14641 736 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 HOXC11O43248 304 aaPredicted RBP12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 RNGTTO60942 597 aaKnown RBP12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 ATP5A1P25705 553 aaKnown RBP12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 ACVR2AP27037 513 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC27A4Q6P1M0 643 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM53Q6P2H8 277 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 ASB18Q6ZVZ8 466 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 SAMD8Q96LT4 415 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM168Q9H0V1 697 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 USP36Q9P275 1121 aaKnown RBP12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 MAFFQ9ULX9 164 aa12.83□□□□□ -0.35
PRPF40B-209ENST00000548825 SOCS6O14544 535 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PAICSP22234 425 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 MTNR1AP48039 350 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 DMPKQ09013 629 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 TRMT12Q53H54 448 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PLBD1Q6P4A8 553 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PHC2Q8IXK0 858 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 OR2L3Q8NG85 312 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 OR52P1PQ8NH57 321 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms