RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 HIST2H2BDQ6DRA6 164 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 RPUSD3Q6P087 351 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 TRIM65Q6PJ69 517 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 IGFL2Q6UWQ7 119 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 GALNTL5Q7Z4T8 443 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 CPLX4Q7Z7G2 160 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 HAPLN4Q86UW8 402 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 NT5DC3Q86UY8 548 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 DOLPP1Q86YN1 238 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 ZNF547Q8IVP9 402 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 BEST3Q8N1M1 668 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 BBS5Q8N3I7 341 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 C2orf73Q8N5S3 287 aaPredicted RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 OR11G2Q8NGC1 345 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 OR5M9Q8NGP3 310 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 OR8K5Q8NH50 307 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 MAGEC3Q8TD91 643 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 TEKT4Q8WW24 435 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 PIH1D2Q8WWB5 315 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 LCN9Q8WX39 176 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 RND1Q92730 232 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 TANKQ92844 425 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 NT5C3BQ969T7 300 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SCRN2Q96FV2 425 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 RBM41Q96IZ5 413 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 HARBI1Q96MB7 349 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 MCEEQ96PE7 176 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SIGLEC12Q96PQ1 595 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 NUDCD1Q96RS6 583 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SH3GL2Q99962 352 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 C17orf62Q9BQA9 187 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 AP1M1Q9BXS5 423 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SRMSQ9H3Y6 488 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 DDX31Q9H8H2 851 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 FAM60AQ9NP50 221 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 IL17CQ9P0M4 197 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 EPHA6Q9UF33 1036 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 CIDEBQ9UHD4 219 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SLC24A2Q9UI40 661 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 GNPTGQ9UJJ9 305 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 DNAJC12Q9UKB3 198 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 PLAGL1Q9UM63 463 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 L3MBTL1Q9Y468 752 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 CAPN7Q9Y6W3 813 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 HCFC1P51610 2035 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SPG11Q96JI7 2443 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 USP27XA6NNY8 438 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 HNRNPCL2B2RXH8 293 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 BTN3A3O00478 584 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 TFECO14948 347 aaPredicted RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 BUD23O43709 281 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 POP7O75817 140 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 MLYCDO95822 493 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 HPP00738 406 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 HOXD4P09016 255 aaPredicted RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 HBQ1P09105 142 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 CYP11B1P15538 503 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 IL7RP16871 459 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 ZNF24P17028 368 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ERCC2P18074 760 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 TEAD1P28347 426 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 PRDX3P30048 256 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 CHRNB4P30926 498 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 BSGP35613 385 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 CSNK1DP48730 415 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 NR0B1P51843 470 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 CTSCP53634 463 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 NUP107P57740 925 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ERVFC1-1P60608 527 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 TFF3Q07654 80 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 KLC1Q07866 573 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 TMEM115Q12893 351 aaPredicted RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 ZNF155Q12901 538 aaPredicted RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 FRG1Q14331 258 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 MEA1Q16626 185 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 TSTQ16762 297 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 FILIP1LQ4L180 1135 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 HSP90AA4PQ58FG1 418 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ANKRD20A8PQ5CZ79 823 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 SPINK14Q6IE38 97 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 RHBDD2Q6NTF9 364 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ARSKQ6UWY0 536 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ABRAXAS1Q6UWZ7 409 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 FAM151BQ6UXP7 276 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 UNQ6126/PRO20091Q6UXV3 157 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 COX15Q7KZN9 410 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 NLRP9Q7RTR0 991 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 AMZ2Q86W34 360 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 ARHGAP12Q8IWW6 846 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 EID3Q8N140 333 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 UMODL1-AS1Q8N2C9 162 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 CPSF7Q8N684 471 aaKnown RBP3.85□□□□□ -1.79
CBX5-203ENST00000547872 LMNTD1Q8N9Z9 388 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 GPR26Q8NDV2 337 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 SECTM1Q8WVN6 248 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 NELFBQ8WX92 580 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 GLYATL1Q969I3 302 aa3.85□□□□□ -1.79
CBX5-203ENST00000547872 INTS12Q96CB8 462 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms