RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 C3orf14Q9HBI5 128 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF160Q9HCG1 818 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 SIRT3Q9NTG7 399 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-226ENST00000547259 PTGFRNQ9P2B2 879 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 BCAP29Q9UHQ4 241 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 TEKT2Q9UIF3 430 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 CSAG2Q9Y5P2 127 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 OTOGQ6ZRI0 2925 aa11.19□□□□□ -0.62
HDAC7-226ENST00000547259 F8P00451 2351 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 A0A087WV62 115 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 A0A1W2PQ72 361 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 HRKO00198 91 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 PLOD2O00469 737 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 AIM2O14862 343 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 EMC8O43402 210 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 PRAMEF2O60811 474 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 COQ9O75208 318 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 ERN1O75460 977 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 BCAS2O75934 225 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 UBOX5O94941 541 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 IFI6P09912 130 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 ESRRAP11474 423 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 UQCRC2P22695 453 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 SSTR4P31391 388 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 CHI3L1P36222 383 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 NUDT2P50583 147 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 TNFSF10P50591 281 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 MXRA7P84157 204 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 PRR5P85299 388 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 TP53BP2Q13625 1128 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 EXOSC7Q15024 291 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 EXT1Q16394 746 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 BTBD16Q32M84 506 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 ANGPTL8Q6UXH0 198 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 TMEM64Q6YI46 380 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 RNF111Q6ZNA4 994 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF621Q6ZSS3 439 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 DPP10Q8N608 796 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 OR52R1Q8NGF1 315 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 OR56A1Q8NGH5 318 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 GOT1L1Q8NHS2 421 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 PSMA8Q8TAA3 256 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 NR4A3Q92570 626 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 NCLNQ969V3 563 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 CTHRC1Q96CG8 243 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 FAM120BQ96EK7 910 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 VMP1Q96GC9 406 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 SENP5Q96HI0 755 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 NSL1Q96IY1 281 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 SLC35A5Q9BS91 424 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 PAIP1Q9H074 479 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 RNF32Q9H0A6 362 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 EFCAB1Q9HAE3 211 aa11.18□□□□□ -0.62
HDAC7-226ENST00000547259 ZCCHC3Q9NUD5 404 aaKnown RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-226ENST00000547259 GTF3C1Q12789 2109 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 TRBV11-1A0A0K0K1C0 115 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 MASP2O00187 686 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 UPK1AO00322 258 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 PLOD3O60568 738 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 CBX7O95931 251 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZCCHC18P0CG32 403 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 CALB2P22676 271 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 CCT3P49368 545 aaKnown RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 PRKAG1P54619 331 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 FUT7Q11130 342 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF155Q12901 538 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 GTDC1Q4AE62 458 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 LRIF1Q5T3J3 769 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 BHLHB9Q6PI77 547 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 GDF7Q7Z4P5 450 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 CLEC4FQ8N1N0 589 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF321PQ8N8H1 164 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 NFAM1Q8NET5 270 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 OR7G1Q8NGA0 311 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF721Q8TF20 911 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ROPN1LQ96C74 230 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 SLC35G5Q96KT7 338 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 MS4A4EQ96PG1 132 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 OR10A5Q9H207 317 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 EQTNQ9NQ60 294 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 SLC6A13Q9NSD5 602 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 GID8Q9NWU2 228 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ABI3Q9P2A4 366 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF639Q9UID6 485 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 C19orf53Q9UNZ5 99 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-226ENST00000547259 PCDHB14Q9Y5E9 798 aa11.17□□□□□ -0.62
HDAC7-226ENST00000547259 NUP214P35658 2090 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-226ENST00000547259 EBAG9O00559 213 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 RASAL1O95294 804 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms