RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PIP4P2Q8N4L2 257 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 OR10H5Q8NGA6 315 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 RNF138Q8WVD3 245 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 EXT2Q93063 718 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 TMBIM1Q969X1 311 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 TNFRSF13CQ96RJ3 184 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 NAT9Q9BTE0 207 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 MCMBPQ9BTE3 642 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 TRAF4Q9BUZ4 470 aaPredicted RBP8.41□□□□□ -1.06
CHD4-212ENST00000545083 CD244Q9BZW8 370 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CAB39LQ9H9S4 337 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 WDR41Q9HAD4 459 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 MOCS1Q9NZB8 636 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 MAT2BQ9NZL9 334 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 BCAP29Q9UHQ4 241 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 ZNF639Q9UID6 485 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 PLLPQ9Y342 182 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 ZNF337Q9Y3M9 751 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 RNF115Q9Y4L5 304 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 MALRD1Q5VYJ5 2156 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 TGP01266 2768 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 A0A1W2PP18 115 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 FAM234BA2RU67 622 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 OR6C70A6NIJ9 312 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 TO15178 435 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 PHGDHO43175 533 aaKnown RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 SPRY1O43609 319 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 NME6O75414 186 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 REM1O75628 298 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 PIAS1O75925 651 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 CCDC166P0CW27 439 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 PORP16435 677 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 PTNP21246 168 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 DRD5P21918 477 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 IGFBP5P24593 272 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 ARFIP1P53367 373 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 DSCR4P56555 118 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 DUSP2Q05923 314 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 TSC22D1Q15714 1073 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 PRICKLE4Q2TBC4 344 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 NCMAPQ5T1S8 102 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 RAET1LQ5VY80 246 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 STEAP4Q687X5 459 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 METTL25Q8N6Q8 603 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 FADS6Q8N9I5 356 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 ADCY4Q8NFM4 1077 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 KBTBD8Q8NFY9 601 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 OR4K14Q8NGD5 310 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 OR6K3Q8NGY3 331 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 C11orf24Q96F05 449 aaPredicted RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 MS4A14Q96JA4 679 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 HS6ST2Q96MM7 605 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 COL21A1Q96P44 957 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 ADOQ96SZ5 270 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 CENPKQ9BS16 269 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 RHNO1Q9BSD3 238 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 SHARPINQ9H0F6 387 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 DSN1Q9H410 356 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 ESRP2Q9H6T0 727 aaKnown RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 POPDC3Q9HBV1 291 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 LPAR3Q9UBY5 353 aa8.4□□□□□ -1.06
CHD4-212ENST00000545083 MTO1Q9Y2Z2 717 aaKnown RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 YLPM1P49750 1951 aaKnown RBP8.4□□□□□ -1.06
CHD4-212ENST00000545083 OR2M5A3KFT3 312 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 SLC35F4A4IF30 521 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 H3BML4 177 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 DNALI1O14645 258 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 TSPAN2O60636 221 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 SIX3O95343 332 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 CD3EP07766 207 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 CTAGE8P0CG41 777 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 SRD5A1P18405 259 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 HK1P19367 917 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 PSMB1P20618 241 aaKnown RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 PTX3P26022 381 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 FEN1P39748 380 aaKnown RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 PPICP45877 212 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 EMDP50402 254 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 EEFSECP57772 596 aaKnown RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 GPX6P59796 221 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 LOXL1Q08397 574 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 MGAT5Q09328 741 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 MAP4K2Q12851 820 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 LTB4RQ15722 352 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 TRMT12Q53H54 448 aaKnown RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 C6orf163Q5TEZ5 329 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 SEZ6L2Q6UXD5 910 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 NUDT13Q86X67 352 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 MYLK4Q86YV6 388 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 CTAGE4Q8IX94 777 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 ZNF619Q8N2I2 560 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 OR2M3Q8NG83 312 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 OR4K17Q8NGC6 315 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 OR52R1Q8NGF1 315 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 S100PBPQ96BU1 408 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 TMCO6Q96DC7 493 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms