RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 AIFM1O95831 613 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 AK1P00568 194 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 THBS1P07996 1170 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 GJA4P35212 333 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 HOXD12P35452 270 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 DDOSTP39656 456 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 OPRD1P41143 372 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 TNFRSF4P43489 277 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 HTR3AP46098 478 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 LRRC32Q14392 662 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 SUZ12Q15022 739 aaKnown RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 TRAM1Q15629 374 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 MLF2Q15773 248 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 NXNL2Q5VZ03 156 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 HEPHL1Q6MZM0 1159 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ACSM5Q6NUN0 579 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 MZT2BQ6NZ67 158 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 FAM180BQ6P0A1 224 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 CDC73Q6P1J9 531 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ZCCHC12Q6PEW1 402 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 VITQ6UXI7 678 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF793Q6ZN11 406 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 QSOX2Q6ZRP7 698 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 MBOAT2Q6ZWT7 520 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 PRICKLE2Q7Z3G6 844 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 RANBP3LQ86VV4 465 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 DIO2Q92813 273 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 CNRIP1Q96F85 164 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 SCARF2Q96GP6 870 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 DIRAS2Q96HU8 199 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 SLC6A18Q96N87 628 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 KCNN2Q9H2S1 579 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 FN3KQ9H479 309 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 KCNK12Q9HB15 430 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ZDHHC4Q9NPG8 344 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 SACM1LQ9NTJ5 587 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ERVK13-1Q9NX77 482 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 EXOGQ9Y2C4 368 aaKnown RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 V9GYH0 126 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 SPACA6W5XKT8 324 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 KIF26AQ9ULI4 1882 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-223ENST00000544669 IGKV1-8A0A0C4DH67 115 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 TMCC2O75069 709 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SLC35G6P0C7Q6 338 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 IL7P13232 177 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ETV5P41161 510 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ETV1P50549 477 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CDH11P55287 796 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 RGS8P57771 180 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 HYAL2Q12891 473 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 FOXD4Q12950 439 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CAMK1Q14012 370 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 GPR19Q15760 415 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 GLYR1Q49A26 553 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CRTC2Q53ET0 693 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SDE2Q6IQ49 451 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF425Q6IV72 752 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 LRRC25Q8N386 305 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 OR2T33Q8NG76 320 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 OR8K5Q8NH50 307 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 OR52P1PQ8NH57 321 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 GPR151Q8TDV0 419 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SLC9A6Q92581 669 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SERINC2Q96SA4 455 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SDHCQ99643 169 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SLC17A9Q9BYT1 436 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 BARHL1Q9BZE3 327 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SLC38A1Q9H2H9 487 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 NEK6Q9HC98 313 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 TM7SF3Q9NS93 570 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 FBXL12Q9NXK8 326 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 PCYT1BQ9Y5K3 369 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CENPXA8MT69 81 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 RGS13O14921 159 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 SLC19A2O60779 497 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 PAK4O96013 591 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CEACAM5P06731 702 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ASGR2P07307 311 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 HTR1FP30939 366 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 RNF144AP50876 292 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ERVK-21P61565 698 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 RPE65Q16518 533 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 LCN1P1Q5VSP4 162 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 TMEM107Q6UX40 140 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CDK20Q8IZL9 346 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ZFYVE19Q96K21 471 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF681Q96N22 645 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms