RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 EFR3AQ14156 821 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 LASP1Q14847 261 aaKnown RBP11.25□□□□□ -0.61
DDX55-210ENST00000543016 KRT72Q14CN4 511 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 DECR1Q16698 335 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 FCRLBQ6BAA4 426 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 RTL4Q6ZR62 310 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 ASB18Q6ZVZ8 466 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 NUP54Q7Z3B4 507 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 SLC44A2Q8IWA5 706 aaPredicted RBP11.25□□□□□ -0.61
DDX55-210ENST00000543016 SIMC1Q8NDZ2 872 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 ZFP90Q8TF47 636 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 SPACA9Q96E40 222 aaPredicted RBP11.25□□□□□ -0.61
DDX55-210ENST00000543016 SLC35G5Q96KT7 338 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 BTBD2Q9BX70 525 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 SLC25A18Q9H1K4 315 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 ANKRA2Q9H9E1 313 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 EFCAB1Q9HAE3 211 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 TPT1P8Q9HAU6 139 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 HHATLQ9HCP6 504 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 EXD2Q9NVH0 621 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 GID8Q9NWU2 228 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 HPF1Q9NWY4 346 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 ARMCX1Q9P291 453 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 AP3M1Q9Y2T2 418 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 PCDHB14Q9Y5E9 798 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 NPFFR2Q9Y5X5 522 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 LOC100653049A0A140TA62 436 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 ASPDHA6ND91 283 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 OR6C70A6NIJ9 312 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 EVPLLA8MZ36 301 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CLIC1O00299 241 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 PPM1BO75688 479 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 KRT34O76011 436 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 GSNP06396 782 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 COX4I1P13073 169 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CD46P15529 392 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 ABCD3P28288 659 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 PIGAP37287 484 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CD96P40200 585 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CDKN2CP42773 168 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 KHKP50053 298 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 PNLIPRP2P54317 469 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 OC90Q02509 493 aaPredicted RBP11.24□□□□□ -0.61
DDX55-210ENST00000543016 PLCXD2Q0VAA5 305 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 GAB1Q13480 694 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 NFYCQ13952 458 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 NTRK2Q16620 822 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
DDX55-210ENST00000543016 ZNF791Q3KP31 576 aaPredicted RBP11.24□□□□□ -0.61
DDX55-210ENST00000543016 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 ATAD3BQ5T9A4 648 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 COX18Q8N8Q8 333 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 SLC16A11Q8NCK7 471 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 OR52N2Q8NGI0 321 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 OR5AK3PQ8NH89 298 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 GPR151Q8TDV0 419 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 OIT3Q8WWZ8 545 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 SLC9A6Q92581 669 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 JADE3Q92613 823 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TMEM125Q96AQ2 219 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 ROPN1LQ96C74 230 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 SLC35A4Q96G79 324 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 G6PC3Q9BUM1 346 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TIMMDC1Q9NPL8 285 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CNIH4Q9P003 139 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 LRFN1Q9P244 771 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 CBLCQ9ULV8 474 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 LIPT1Q9Y234 373 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TP53TG5Q9Y2B4 290 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 DTX4Q9Y2E6 619 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 SPTA1P02549 2419 aa11.24□□□□□ -0.61
DDX55-210ENST00000543016 TRBV5-3A0A0A0MS03 114 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 C15orf38-AP3S2A0A0A6YYH1 394 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 FBP2O00757 339 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 MRASO14807 208 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
DDX55-210ENST00000543016 HS6ST1O60243 411 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 IL33O95760 270 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 ACP2P11117 423 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 HOXB9P17482 250 aaPredicted RBP11.23□□□□□ -0.61
DDX55-210ENST00000543016 SOX3P41225 446 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 TNFSF10P50591 281 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 CORO7P57737 925 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 POU6F2P78424 691 aaPredicted RBP11.23□□□□□ -0.61
DDX55-210ENST00000543016 GNA13Q14344 377 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 OR1C1Q15619 314 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 DUSP5Q16690 384 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.23□□□□□ -0.61
DDX55-210ENST00000543016 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
DDX55-210ENST00000543016 TMEM81Q6P7N7 255 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms