RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CA7P43166 264 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 CLDN8P56748 225 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 RBPJQ06330 500 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 RGS9BPQ6ZS82 235 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 NUP54Q7Z3B4 507 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 KIRREL3Q8IZU9 778 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 ZFP28Q8NHY6 868 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 JSRP1Q96MG2 331 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 PSMG3-AS1Q96PY0 264 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 WDR55Q9H6Y2 383 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 ZFP64Q9NPA5 681 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 SIRT3Q9NTG7 399 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 NTMQ9P121 344 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 HRH3Q9Y5N1 445 aa16.77■□□□□ 0.28
SNRPA1-203ENST00000540017 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 ACOT7O00154 380 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 KLF11O14901 512 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 HDAC3O15379 428 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 ALDOCP09972 364 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 LBPP18428 481 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 RPL3P39023 403 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 C21orf58P58505 322 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 GAB1Q13480 694 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 CPTPQ5TA50 214 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 MAVSQ7Z434 540 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 TRIM42Q8IWZ5 723 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 FAM109AQ8N4B1 249 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 GIMAP5Q96F15 307 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 COL21A1Q96P44 957 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 ADOQ96SZ5 270 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF703Q9H7S9 590 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 GALNT9Q9HCQ5 603 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 EQTNQ9NQ60 294 aa16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 BOKQ9UMX3 212 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-203ENST00000540017 GTF3C1Q12789 2109 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 UTP20O75691 2785 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 GOLGA8QA0A0J9YX86 632 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 A0A1B0GUH1 482 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 A0A1W2PRB8 838 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 GOLGA8OA6NCC3 632 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 OR6C70A6NIJ9 312 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 GOLGA8NF8WBI6 632 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 ANKRD28O15084 1053 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 IGHG3P01860 377 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 ABOP16442 354 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 EPHA3P29320 983 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 MAP3K8P41279 467 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 PRKAG1P54619 331 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 MLC1Q15049 377 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 TBCELQ5QJ74 424 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 TMEM81Q6P7N7 255 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 NUP43Q8NFH3 380 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 EFHD2Q96C19 240 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC35A4Q96G79 324 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 LMF2Q9BU23 707 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 OR10H1Q9Y4A9 318 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF407Q9C0G0 2248 aa16.75■□□□□ 0.27
SNRPA1-203ENST00000540017 GXYLT2A0PJZ3 443 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 HMGB1P1B2RPK0 211 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 CCL21O00585 134 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF195O14628 629 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ZG16O60844 167 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ICOSLGO75144 302 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 SNX4O95219 450 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 C6orf47O95873 294 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 PTGS2P35354 604 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 RPP38P78345 283 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC10A1Q14973 349 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 PGS1Q32NB8 556 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 TMEM198Q66K66 360 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 OR4F3Q6IEY1 312 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 OGFOD2Q6N063 350 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 C3P1Q6ZMU1 363 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 TRILQ7L0X0 811 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 CAMKMTQ7Z624 323 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 DOLPP1Q86YN1 238 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 LRRC34Q8IZ02 419 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 OR5P2Q8WZ92 322 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 HOXB13Q92826 284 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 FAM120BQ96EK7 910 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 C16orf58Q96GQ5 468 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF597Q96LX8 424 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 GNRHR2Q96P88 292 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 PHF12Q96QT6 1004 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 DUSP26Q9BV47 211 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 BHLHE41Q9C0J9 482 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 CXorf36Q9H7Y0 433 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ATAD3AQ9NVI7 634 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNF446Q9NWS9 450 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 TNFRSF10DQ9UBN6 386 aa16.74■□□□□ 0.27
SNRPA1-203ENST00000540017 A0A1B0GVC2 190 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PRAMEF25A6NGN4 478 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 GNB5O14775 395 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 EMC8O43402 210 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 ACP2P11117 423 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 CYP4B1P13584 511 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 GABRA3P34903 492 aa16.73■□□□□ 0.27
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