RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MRM1Q6IN84 353 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 NOXRED1Q6NXP6 359 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SLC30A6Q6NXT4 461 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SLC48A1Q6P1K1 146 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM207Q6UWW9 146 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 IGFL3Q6UXB1 125 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 NAPRTQ6XQN6 538 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ATG14Q6ZNE5 492 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 COMMD6Q7Z4G1 85 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 C2orf73Q8N5S3 287 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 Q8NFD4 153 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 OR9A4Q8NGU2 314 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 C11orf24Q96F05 449 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 STACQ99469 402 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PSD2Q9BQI7 771 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ALOXE3Q9BYJ1 711 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 EPN3Q9H201 632 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CAAP1Q9H8G2 361 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MEAF6Q9HAF1 191 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 BTNL2Q9UIR0 455 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FBXW2Q9UKT8 454 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 DTX4Q9Y2E6 619 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CAB39Q9Y376 341 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CEP192Q8TEP8 1941 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 PI4KAP42356 2102 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 A0A0A6YYD5 115 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 PRSS51A0A1B0GVH4 220 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 C2orf92A0A1B0GVN3 265 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 A0A1W2PPM1 405 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 FAM234BA2RU67 622 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 MASP2O00187 686 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ANKRD28O15084 1053 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ASNA1O43681 348 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 B4GALT2O60909 372 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CTSVO60911 334 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 DBTP11182 482 aaKnown RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 LIFP15018 202 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 IL1RNP18510 177 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ITIH1P19827 911 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 UQCRC2P22695 453 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 MPSTP25325 297 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ELAVL4P26378 380 aaKnown RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 GCGRP47871 477 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ALDH9A1P49189 494 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CYB561P49447 251 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 HLCSP50747 726 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 SLC26A5P58743 744 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 RAB8AP61006 207 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 RPL38P63173 70 aaKnown RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 POU6F2P78424 691 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 KCNJ10P78508 379 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 TIAL1Q01085 375 aaKnown RBP eCLIP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 LGALS3BPQ08380 585 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 RBBP4Q09028 425 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 BST1Q10588 318 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 DLG1Q12959 904 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 IL10RAQ13651 578 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ABRAXAS2Q15018 415 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF630Q2M218 657 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 DEFB110Q30KQ9 67 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 DEFB109BQ30KR1 87 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 GLYR1Q49A26 553 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 DCAF10Q5QP82 559 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 C1orf189Q5VU69 101 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 WDR73Q6P4I2 378 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 C5orf46Q6UWT4 87 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 GPR141Q7Z602 305 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CAMKMTQ7Z624 323 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ANKRD37Q7Z713 158 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 SLC22A16Q86VW1 577 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CMIPQ8IY22 773 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 SLC34A3Q8N130 599 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 VWA5B2Q8N398 1253 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 LIX1Q8N485 282 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 ADAMTS15Q8TE58 950 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 GIPC3Q8TF64 312 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CHMP6Q96FZ7 201 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 PEX11GQ96HA9 241 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 C10orf90Q96M02 699 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 MS4A4EQ96PG1 132 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 F2RL3Q96RI0 385 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 EPB41L4BQ9H329 900 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 KRCC1Q9NPI7 259 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-211ENST00000538253 SH3BP4Q9P0V3 963 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 UTS2RQ9UKP6 389 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 IFT52Q9Y366 437 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 CHD8Q9HCK8 2581 aa3.34□□□□□ -1.87
PTPN22-211ENST00000538253 A0A1W2PRB8 838 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 DBX1A6NMT0 343 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PRSS44E7EML9 344 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 RNASET2O00584 256 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 OR7A17O14581 309 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 FFAR3O14843 346 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 GPR42O15529 346 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 SLC22A3O75751 556 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 RBBP9O75884 186 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PDYNP01213 254 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms