RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SARAFQ96BY9 339 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 ELP4Q96EB1 424 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 COL21A1Q96P44 957 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 NODALQ96S42 347 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 NTMQ9P121 344 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 C15orf41Q9Y2V0 281 aa15.74■□□□□ 0.11
SFSWAP-205ENST00000537164 ARHGAP21Q5T5U3 1957 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 PDPK1O15530 556 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 ICOSLGO75144 302 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 ZWINTO95229 277 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 SERPINE1P05121 402 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 PNLIPRP2P54317 469 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 GALNTL6Q49A17 601 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 ZNF385BQ569K4 471 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 C6orf136Q5SQH8 315 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 TIGD3Q6B0B8 471 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 ZNF787Q6DD87 383 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 DESI1Q6ICB0 168 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 TMEM107Q6UX40 140 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 NCCRP1Q6ZVX7 275 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 AGR3Q8TD06 166 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 HOXB13Q92826 284 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 TMBIM1Q969X1 311 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 TSSK3Q96PN8 268 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 LDAHQ9H6V9 325 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 PNPLA3Q9NST1 481 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 ACSS1Q9NUB1 689 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 BAIAP2L1Q9UHR4 511 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 CACNA1DQ01668 2161 aa15.73■□□□□ 0.11
SFSWAP-205ENST00000537164 FIGNL2A6NMB9 653 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 TMEM114B3SHH9 223 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 PRSS44E7EML9 344 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 WDR1O75083 606 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 NME6O75414 186 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 CLDN14O95500 239 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 HOXD4P09016 255 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 GRK2P25098 689 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 ACVR2AP27037 513 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 GDF1P27539 372 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 MAPK1P28482 360 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 PTPN6P29350 595 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 CDK9P50750 372 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 EFR3AQ14156 821 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 CDSNQ15517 529 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 SP5Q6BEB4 398 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 GFM2Q969S9 779 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 PPCDCQ96CD2 204 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 TMCO6Q96DC7 493 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 ZBED6CLQ96FA7 236 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 PKNOX2Q96KN3 472 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 JSRP1Q96MG2 331 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 GNRHR2Q96P88 292 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 OSBPL11Q9BXB4 747 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 METTL7AQ9H8H3 244 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 CHST11Q9NPF2 352 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 DDX18Q9NVP1 670 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 SPRR3Q9UBC9 169 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 ATP6V1HQ9UI12 483 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 HAO1Q9UJM8 370 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 FBN2P35556 2912 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 ABCA12Q86UK0 2595 aa15.72■□□□□ 0.11
SFSWAP-205ENST00000537164 TTC36A6NLP5 189 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 SNPHO15079 494 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ITM2AO43736 263 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 REM1O75628 298 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 MYZAPP0CAP1 466 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 HTR1EP28566 365 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 MAP3K8P41279 467 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 MASP1P48740 699 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 MLC1Q15049 377 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 CHI3L2Q15782 390 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 SMU1Q2TAY7 513 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ATP6AP1LQ52LC2 224 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 NHSL2Q5HYW2 709 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 BEND6Q5SZJ8 279 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 WLSQ5T9L3 541 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 RTL6Q6ICC9 239 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ACAD11Q709F0 780 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ZNF551Q7Z340 670 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 R3HCC1LQ7Z5L2 792 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 SLC44A2Q8IWA5 706 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 RPRMLQ8N4K4 120 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 OR1J4Q8NGS1 313 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ADOQ96SZ5 270 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 LMF2Q9BU23 707 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 C20orf27Q9GZN8 174 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 SLC6A15Q9H2J7 730 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 ACAD8Q9UKU7 415 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 FAM215AQ9Y5M1 114 aa15.71■□□□□ 0.11
SFSWAP-205ENST00000537164 PRAMEF25A6NGN4 478 aa15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 SCAMP2O15127 329 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 AKAP10O43572 662 aa15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 PEX11AO75192 247 aa15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 ERLIN1O75477 346 aa15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 LYPLA1O75608 230 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 HSPA4LO95757 839 aa15.7■□□□□ 0.1
SFSWAP-205ENST00000537164 PRPS2P11908 318 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms