RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 HBEGFQ99075 208 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 MS4A8Q9BY19 250 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 PITHD1Q9GZP4 211 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 FANCFQ9NPI8 374 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 C20orf96Q9NUD7 363 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 TMEFF2Q9UIK5 374 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 SNX8Q9Y5X2 465 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 A0A1W2PR48 441 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 H3BML4 177 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 H7C417 338 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 SS18L1O75177 396 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 PLGP00747 810 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 TGFB1P01137 390 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 S1PR1P21453 382 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 TLX1P31314 330 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 NAP1L1P55209 391 aaKnown RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 LGALS3BPQ08380 585 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 PLCXD2Q0VAA5 305 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 SGCBQ16585 318 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 SFRP5Q5T4F7 317 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 DEPDC1Q5TB30 811 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 RAET1LQ5VY80 246 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 PPP4R4Q6NUP7 873 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 MFSD12Q6NUT3 480 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 PEG10Q86TG7 708 aaKnown RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 STK32CQ86UX6 486 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 GALNT12Q8IXK2 581 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 GABRG1Q8N1C3 465 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 MUC15Q8N387 334 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 METTL25Q8N6Q8 603 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF473Q8WTR7 871 aaKnown RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 FOXN4Q96NZ1 517 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 EGFL8Q99944 293 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 HDHD5Q9BXW7 423 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 ITPAQ9BY32 194 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 STMN4Q9H169 189 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 OR51B5Q9H339 312 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 C12orf49Q9H741 205 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 METTL17Q9H7H0 456 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 IARS2Q9NSE4 1012 aaKnown RBP7.35□□□□□ -1.23
CLIP1-206ENST00000535290 FBXO34Q9NWN3 711 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 MS4A12Q9NXJ0 267 aa7.35□□□□□ -1.23
CLIP1-206ENST00000535290 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 OR2M5A3KFT3 312 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 LRP5LA4QPB2 252 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 NPEPPSL1A6NEC2 478 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 SDR42E2A6NKP2 422 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 ABCD4O14678 606 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 COL6A2P12110 1019 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 FCGR2AP12318 317 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 HK1P19367 917 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 TPSB2P20231 275 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 IL32P24001 234 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 GRK2P25098 689 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 PDLIM4P50479 330 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 GAS1P54826 345 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 DSCR4P56555 118 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 RPS3AP61247 264 aaKnown RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 TPM4P67936 248 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 CDK16Q00536 496 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 P2RY6Q15077 328 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 TPSAB1Q15661 275 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 OCLNQ16625 522 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 TMEM35AQ53FP2 167 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 FBXO48Q5FWF7 155 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 OR4C11Q6IEV9 310 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 CCDC25Q86WR0 208 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 RNF175Q8N4F7 328 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 UBL4BQ8N7F7 174 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 C2CD4AQ8NCU7 369 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 OR4K17Q8NGC6 315 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 CALML6Q8TD86 181 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 GFM2Q969S9 779 aaKnown RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 NXNL1Q96CM4 212 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 SERPINB12Q96P63 405 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 DHRS9Q9BPW9 319 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 FRMD8P1Q9BZ68 369 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 PRRG4Q9BZD6 226 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 DSN1Q9H410 356 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 EHD1Q9H4M9 534 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 NPAP1Q9NZP6 1156 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 XPR1Q9UBH6 696 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 ASIC3Q9UHC3 531 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 PHF11Q9UIL8 331 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 ASB4Q9Y574 426 aa7.34□□□□□ -1.23
CLIP1-206ENST00000535290 KMT2CQ8NEZ4 4911 aaKnown RBP7.34□□□□□ -1.23
CLIP1-206ENST00000535290 MAGEB16A2A368 324 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 CLGNO14967 610 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 PGRMC2O15173 223 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 SMAD9O15198 467 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 TMPRSS11DO60235 418 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EEDO75530 441 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 AHSGP02765 367 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 NR2F6P10588 404 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EPB42P16452 691 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms