RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 C16orf62Q7Z3J2 963 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 OR9A2Q8NGT5 310 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 ASB15Q8WXK1 588 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 DIO2Q92813 273 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 RNFT2Q96EX2 444 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 FBXL12Q9NXK8 326 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 OR6C2Q9NZP2 312 aa19.93■□□□□ 0.78
VPS28-205ENST00000526204 EXOSC1Q9Y3B2 195 aaKnown RBP19.93■□□□□ 0.78
VPS28-205ENST00000526204 CCNYL3P0C7X3 344 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 IGFALSP35858 605 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 MTNR1AP48039 350 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 GAS1P54826 345 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 PLK5Q496M5 336 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 TJAP1Q5JTD0 557 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 PRICKLE2Q7Z3G6 844 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 OR14C36Q8NHC7 312 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 PIGXQ8TBF5 258 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 SCARF2Q96GP6 870 aaPredicted RBP19.92■□□□□ 0.78
VPS28-205ENST00000526204 TEX12Q9BXU0 123 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 EQTNQ9NQ60 294 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 C14orf119Q9NWQ9 140 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 CMAHPQ9Y471 501 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 SPIN1Q9Y657 262 aaPredicted RBP19.92■□□□□ 0.78
VPS28-205ENST00000526204 CHD7Q9P2D1 2997 aa19.92■□□□□ 0.78
VPS28-205ENST00000526204 ISM1B1AKI9 464 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 PLRG1O43660 514 aaKnown RBP19.91■□□□□ 0.78
VPS28-205ENST00000526204 DYRK3O43781 588 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 TPBGQ13641 420 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 TMEM44Q2T9K0 475 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 MTSS1LQ765P7 747 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 VRK2Q86Y07 508 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 ANKK1Q8NFD2 765 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 GPR151Q8TDV0 419 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 SLC9A6Q92581 669 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 GAL3ST3Q96A11 431 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 MED18Q9BUE0 208 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 V9GYH0 126 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 CDRT1O95170 752 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 AGR2O95994 175 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 NDUFS1P28331 727 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 BTN3A2P78410 334 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 AMIGO1Q86WK6 493 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 SAMD14Q8IZD0 417 aaPredicted RBP19.91■□□□□ 0.78
VPS28-205ENST00000526204 ADAMTS15Q8TE58 950 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 OSTF1Q92882 214 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 RFKQ969G6 155 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 OR2A14Q96R47 310 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 SEMA4GQ9NTN9 838 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 NPAP1Q9NZP6 1156 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 PCDHGB2Q9Y5G2 931 aa19.91■□□□□ 0.78
VPS28-205ENST00000526204 A0A1W2PS29 197 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 CPSF4LA6NMK7 179 aaKnown RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 KDM4EB2RXH2 506 aaPredicted RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 AP3D1O14617 1153 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 RNGTTO60942 597 aaKnown RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 CA3P07451 260 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 STAT5AP42229 794 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 OMPP47874 163 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 ERVK-21P61565 698 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 RPS15AP62244 130 aaKnown RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 KCNJ8Q15842 424 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 DECR1Q16698 335 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 SCAIQ8N9R8 606 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 IL17RDQ8NFM7 739 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 TOR1AIP2Q8NFQ8 470 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 LCN9Q8WX39 176 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 KCTD7Q96MP8 289 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 PLA2G2FQ9BZM2 168 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 TPK1Q9H3S4 243 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 DZANK1Q9NVP4 752 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 H3BQ06 376 aaPredicted RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 SLC30A4O14863 429 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 PLD2O14939 933 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 CHRM5P08912 532 aaPredicted RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 FPR3P25089 353 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 CASP3P42574 277 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 RGS1Q08116 209 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 FAM214AQ32MH5 1076 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 ITPRIPL2Q3MIP1 535 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 HSDL2Q6YN16 418 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 LAX1Q8IWV1 398 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 OR8D4Q8NGM9 314 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 OR52P1PQ8NH57 321 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 ACOT11Q8WXI4 607 aaPredicted RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 FAM131CQ96AQ9 280 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 ZG16BQ96DA0 208 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 GIMAP5Q96F15 307 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 NTMQ9P121 344 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 TBC1D24Q9ULP9 559 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 CARD8Q9Y2G2 431 aa19.9■□□□□ 0.78
VPS28-205ENST00000526204 GPR55Q9Y2T6 319 aaPredicted RBP19.9■□□□□ 0.78
VPS28-205ENST00000526204 SLC9A3P48764 834 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 LRIT3Q3SXY7 679 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 C22orf42Q6IC83 251 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 HEPHL1Q6MZM0 1159 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 PAQR7Q86WK9 346 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 KAT2AQ92830 837 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 UFD1Q92890 307 aa19.89■□□□□ 0.77
VPS28-205ENST00000526204 FAM46AQ96IP4 442 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms