RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SH2D2AQ9NP31 389 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 EML6Q6ZMW3 1958 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 A0A096LPI6 279 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 ASPDHA6ND91 283 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 PTPN6P29350 595 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 SF3A3Q12874 501 aaKnown RBP eCLIP19.13■□□□□ 0.65
CD44-222ENST00000526025 KLF10Q13118 480 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 GAB1Q13480 694 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 LASP1Q14847 261 aaKnown RBP19.13■□□□□ 0.65
CD44-222ENST00000526025 LRIF1Q5T3J3 769 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 C6orf120Q7Z4R8 191 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 SLC44A2Q8IWA5 706 aaPredicted RBP19.13■□□□□ 0.65
CD44-222ENST00000526025 CATSPER1Q8NEC5 780 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 TMEM125Q96AQ2 219 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 SLC35A4Q96G79 324 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 C5orf34Q96MH7 638 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 SIGLEC12Q96PQ1 595 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 CCT8L2Q96SF2 557 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 SLC35A5Q9BS91 424 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 INPP5KQ9BT40 448 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 PIGUQ9H490 435 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 TIMMDC1Q9NPL8 285 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 EQTNQ9NQ60 294 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 ANKRD10Q9NXR5 420 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 LEF1Q9UJU2 399 aaPredicted RBP19.13■□□□□ 0.65
CD44-222ENST00000526025 MRTO4Q9UKD2 239 aaKnown RBP19.13■□□□□ 0.65
CD44-222ENST00000526025 FAF1Q9UNN5 650 aaPredicted RBP19.13■□□□□ 0.65
CD44-222ENST00000526025 ARL2BPQ9Y2Y0 163 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 CSAG2Q9Y5P2 127 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 CAPN7Q9Y6W3 813 aa19.13■□□□□ 0.65
CD44-222ENST00000526025 OR6C70A6NIJ9 312 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 DUXAA6NLW8 204 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 PPM1BO75688 479 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 SLC25A12O75746 678 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 SNRPB2P08579 225 aaKnown RBP19.12■□□□□ 0.65
CD44-222ENST00000526025 ALOX5P09917 674 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 CDKN2CP42773 168 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 MRPS22P82650 360 aaKnown RBP19.12■□□□□ 0.65
CD44-222ENST00000526025 PLCXD2Q0VAA5 305 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 SOWAHCQ53LP3 525 aaPredicted RBP19.12■□□□□ 0.65
CD44-222ENST00000526025 ZNF766Q5HY98 468 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 COQ5Q5HYK3 327 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 SPINK14Q6IE38 97 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 TMEM81Q6P7N7 255 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 IL20RBQ6UXL0 311 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 GK5Q6ZS86 529 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 DPP10Q8N608 796 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 ANKS4BQ8N8V4 417 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 TMEM178AQ8NBL3 297 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 OR5AK3PQ8NH89 298 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 OMA1Q96E52 524 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 SLC35G5Q96KT7 338 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 CBLCQ9ULV8 474 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 OR10H1Q9Y4A9 318 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 PCDHGB3Q9Y5G1 929 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 GMEB1Q9Y692 573 aa19.12■□□□□ 0.65
CD44-222ENST00000526025 BBIP1A8MTZ0 92 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 TP53I11O14683 189 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 ASNA1O43681 348 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 NME2P1O60361 137 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 NME6O75414 186 aaPredicted RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 SORBS2O94875 1100 aaKnown RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 KRT75O95678 551 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 AGR2O95994 175 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 F10P00742 488 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 SP1P08047 785 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 ACP2P11117 423 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 HOXB9P17482 250 aaPredicted RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 NME2P22392 152 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PIGAP37287 484 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 MAN2A2P49641 1150 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PNLIPRP2P54317 469 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PSMD4P55036 377 aaKnown RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 RPP38P78345 283 aaKnown RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 EFR3AQ14156 821 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 UBAP2LQ14157 1087 aaKnown RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 NNATQ16517 81 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 DECR1Q16698 335 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PLEKHN1Q494U1 663 aaPredicted RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 NADK2Q4G0N4 442 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 C6orf10Q5SRN2 563 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 SLC25A25Q6KCM7 469 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 SLC2A7Q6PXP3 512 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 ZNF621Q6ZSS3 439 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 NUP54Q7Z3B4 507 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 SLC16A11Q8NCK7 471 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PAQR8Q8TEZ7 354 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 C16orf58Q96GQ5 468 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PAIP1Q9H074 479 aaKnown RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 MYLK2Q9H1R3 596 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 CNIH4Q9P003 139 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 KLF13Q9Y2Y9 288 aaPredicted RBP19.11■□□□□ 0.65
CD44-222ENST00000526025 NDUFAF1Q9Y375 327 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 PCDHGA10Q9Y5H3 936 aa19.11■□□□□ 0.65
CD44-222ENST00000526025 KALRNO60229 2985 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 ANGPT2O15123 496 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 TSPAN2O60636 221 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 KCNH1O95259 989 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 ANP32DO95626 131 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 LCN1P31025 176 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms