RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RAB17Q9H0T7 212 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 PSME2Q9UL46 239 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 ZNF780BQ9Y6R6 833 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 FAM171A2A8MVW0 826 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 SIAH2O43255 324 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 NME6O75414 186 aaPredicted RBP21.69■■□□□ 1.06
USP47-205ENST00000525257 PDYNP01213 254 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 EEF1A1P68104 462 aaKnown RBP21.69■■□□□ 1.06
USP47-205ENST00000525257 GGTA1PQ4G0N0 100 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 EEF1A1P5Q5VTE0 462 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 CIARTQ8N365 385 aaPredicted RBP21.69■■□□□ 1.06
USP47-205ENST00000525257 COX4I2Q96KJ9 171 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 ADOQ96SZ5 270 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 ANKRA2Q9H9E1 313 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 PFDN4Q9NQP4 134 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 KLHL28Q9NXS3 571 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 XPR1Q9UBH6 696 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 DLGAP4Q9Y2H0 992 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 GPR55Q9Y2T6 319 aaPredicted RBP21.69■■□□□ 1.06
USP47-205ENST00000525257 TLN2Q9Y4G6 2542 aa21.69■■□□□ 1.06
USP47-205ENST00000525257 ZANQ9Y493 2812 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 STX16-NPEPL1H3BU86 382 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 H7C1Q1 480 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 STX16O14662 325 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 MSTNO14793 375 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 CTIFO43310 598 aaKnown RBP21.68■■□□□ 1.06
USP47-205ENST00000525257 HCRTR2O43614 444 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 VWA1Q6PCB0 445 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 PIAS4Q8N2W9 510 aaPredicted RBP21.68■■□□□ 1.06
USP47-205ENST00000525257 CNEP1R1Q8N9A8 125 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 NUDT8Q8WV74 236 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 SELENOMQ8WWX9 145 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 SLC35A4Q96G79 324 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 Q96MF0 132 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 ZNF681Q96N22 645 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 WFIKKN1Q96NZ8 548 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 FAM111AQ96PZ2 611 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 HBEGFQ99075 208 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 LRRC1Q9BTT6 524 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 FAIM2Q9BWQ8 316 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 UBTD1Q9HAC8 227 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 TMCO1Q9UM00 188 aa21.68■■□□□ 1.06
USP47-205ENST00000525257 DEFB108AA8MXU0 73 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 PPP6CO00743 305 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 SMIM24O75264 130 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 RBP1P09455 135 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 TSPAN8P19075 237 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 CORO7P57737 925 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 LETMD1Q6P1Q0 360 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 UBQLNLQ8IYU4 475 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 LRRC75A-AS1Q8N1F1 130 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 C1orf52Q8N6N3 182 aaKnown RBP21.67■■□□□ 1.06
USP47-205ENST00000525257 PIGTQ969N2 578 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 STARD4Q96DR4 205 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 DTNBP1Q96EV8 351 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 PIK3IP1Q96FE7 263 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 PIP5K1AQ99755 562 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 UTS2RQ9UKP6 389 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 PYCARDQ9ULZ3 195 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 FBN3Q75N90 2809 aa21.67■■□□□ 1.06
USP47-205ENST00000525257 C17orf51A8MQB3 221 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 B4DXG7 233 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 SMAD7O15105 426 aaKnown RBP21.66■■□□□ 1.06
USP47-205ENST00000525257 ZIC3O60481 467 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 ABCB7O75027 752 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 ESRRBO95718 433 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 GRK2P25098 689 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 DPP4P27487 766 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 IL12BP29460 328 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 KRT20P35900 424 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 ZNF628Q5EBL2 1059 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 UBAP2Q5T6F2 1119 aaKnown RBP21.66■■□□□ 1.06
USP47-205ENST00000525257 LARP4Q71RC2 724 aaKnown RBP eCLIP21.66■■□□□ 1.06
USP47-205ENST00000525257 CHMP1BQ7LBR1 199 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 KAT2AQ92830 837 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 BTBD9Q96Q07 612 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 CCL19Q99731 98 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 MED18Q9BUE0 208 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 OPN3Q9H1Y3 402 aaPredicted RBP21.66■■□□□ 1.06
USP47-205ENST00000525257 GRPEL1Q9HAV7 217 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 BRF2Q9HAW0 419 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 ZNF226Q9NYT6 803 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 HEY2Q9UBP5 337 aa21.66■■□□□ 1.06
USP47-205ENST00000525257 ESYT3A0FGR9 886 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 SLC22A20A6NK97 555 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 TSPAN2O60636 221 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 RPS17P08708 135 aaKnown RBP21.65■■□□□ 1.06
USP47-205ENST00000525257 CT45A8P0DMV1 189 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 CT45A9P0DMV2 189 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 CD79BP40259 229 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 SIRPAP78324 504 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 EFR3AQ14156 821 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 CT45A2Q5DJT8 189 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 OR2A2Q6IF42 318 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 NPSR1Q6W5P4 371 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 CCDC116Q8IYX3 515 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 OR4K17Q8NGC6 315 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 ZNF675Q8TD23 568 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 SNX6Q9UNH7 406 aa21.65■■□□□ 1.06
USP47-205ENST00000525257 MRPS18CQ9Y3D5 142 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms