RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CSNK2A2P19784 350 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-228ENST00000524023 TRIM23P36406 574 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 IFNGR2P38484 337 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 CHRNEQ04844 493 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 MAP4K2Q12851 820 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 IRF4Q15306 451 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 TAB1Q15750 504 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 CRTC2Q53ET0 693 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-228ENST00000524023 QSOX2Q6ZRP7 698 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 RASSF6Q6ZTQ3 369 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 VRK2Q86Y07 508 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 UFD1Q92890 307 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 ZG16BQ96DA0 208 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 DIRAS2Q96HU8 199 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 SLC38A2Q96QD8 506 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 KATNB1Q9BVA0 655 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 TRMT61BQ9BVS5 477 aaKnown RBP10.4□□□□□ -0.74
HDAC9-228ENST00000524023 RAB11FIP5Q9BXF6 653 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 SEMA4GQ9NTN9 838 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 CNIH4Q9P003 139 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 KCNK6Q9Y257 313 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 GPR55Q9Y2T6 319 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-228ENST00000524023 N6AMT1Q9Y5N5 214 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 FABP12A6NFH5 140 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CPSF4LA6NMK7 179 aaKnown RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SLC30A4O14863 429 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PRICKLE3O43900 615 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 NTN1O95631 604 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ALPPP05187 535 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CSF3P09919 207 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 F3P13726 295 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CERS1P27544 350 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PRR5P85299 388 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 MLLT1Q03111 559 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ASAH1Q13510 395 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TRAM2Q15035 370 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 AGERQ15109 404 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 DDI2Q5TDH0 399 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SLC48A1Q6P1K1 146 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SHFQ7M4L6 423 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 C11orf74Q86VG3 221 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 GDPD1Q8N9F7 314 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SYT14Q8NB59 555 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 NUP43Q8NFH3 380 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 OR2L5Q8NG80 312 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 OR52E1Q8NGJ3 308 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 NR4A3Q92570 626 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 DIO2Q92813 273 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SMARCD2Q92925 531 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 FAM46AQ96IP4 442 aaKnown RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TM9SF2Q99805 663 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ANKRA2Q9H9E1 313 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TOR4AQ9NXH8 423 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SLC13A4Q9UKG4 626 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CHST2Q9Y4C5 530 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PLEKHM1Q9Y4G2 1056 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 MEIOCA2RUB1 952 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 OR52A4PA6NMU1 304 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 RGS13O14921 159 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SEC14L5O43304 696 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PAK4O96013 591 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 FGF9P31371 208 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 GABRA5P31644 462 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TRHRP34981 398 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 AHRP35869 848 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CD79BP40259 229 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 MC3RP41968 323 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 OMPP47874 163 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 FABP5Q01469 135 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TGM3Q08188 693 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ST3GAL3Q11203 375 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 FGL2Q14314 439 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 KRT33BQ14525 404 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PDGFRLQ15198 375 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 CLEC12AQ5QGZ9 265 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF730Q6ZMV8 503 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 GJD3Q8N144 294 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PIAS4Q8N2W9 510 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 FBXL6Q8N531 539 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF485Q8NCK3 441 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 KLK6Q92876 244 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TP53INP1Q96A56 240 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ELP4Q96EB1 424 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 ST6GAL2Q96JF0 529 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 TIMM29Q9BSF4 260 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 OR2B2Q9GZK3 357 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SLC22A4Q9H015 551 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SYNPO2LQ9H987 977 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 POLMQ9NP87 494 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 EQTNQ9NQ60 294 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-228ENST00000524023 SERGEFQ9UGK8 458 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
HDAC9-228ENST00000524023 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SMIM30A4D0T7 59 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 POLR1CO15160 346 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PROM1O43490 865 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 IDH3BO43837 385 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TMCC2O75069 709 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms