RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 PTCHD3Q3KNS1 767 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PCGF3Q3KNV8 242 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TCTE1Q5JU00 501 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 RIPPLY2Q5TAB7 128 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SULT1C3Q6IMI6 304 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 KLC3Q6P597 504 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 FIGLAQ6QHK4 219 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 MBOAT1Q6ZNC8 495 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PRSS42Q7Z5A4 293 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ARHGAP22Q7Z5H3 698 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 VASH2Q86V25 355 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 GPSM1Q86YR5 675 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 OR4N4Q8N0Y3 316 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 KDM8Q8N371 416 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PTGR2Q8N8N7 351 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 LINC01555Q8NAE3 123 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 OR7G3Q8NG95 312 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 OR8K5Q8NH50 307 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 LILRB4Q8NHJ6 448 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 LRRC8CQ8TDW0 803 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ZNF480Q8WV37 535 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 DCAKDQ8WVC6 231 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 KCTD4Q8WVF5 259 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SLC44A1Q8WWI5 657 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ATL1Q8WXF7 558 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SMPDL3AQ92484 453 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 FGF11Q92914 225 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TMIGD2Q96BF3 282 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ZBTB9Q96C00 473 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 NXNL1Q96CM4 212 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 NRBF2Q96F24 287 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PGAM5Q96HS1 289 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TSNARE1Q96NA8 513 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CD180Q99467 661 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SIKE1Q9BRV8 207 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ULBP3Q9BZM4 244 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TINAGL1Q9GZM7 467 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 C11orf54Q9H0W9 315 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 RIBC2Q9H4K1 309 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ZNF768Q9H5H4 540 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 ALG9Q9H6U8 611 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 FANCEQ9HB96 536 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 NMRAL1Q9HBL8 299 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 POPDC3Q9HBV1 291 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 MRPS30Q9NP92 439 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 THSD1Q9NS62 852 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 LANCL2Q9NS86 450 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 OLAHQ9NV23 265 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CD274Q9NZQ7 290 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SPATA7Q9P0W8 599 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CRNNQ9UBG3 495 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 EPHA6Q9UF33 1036 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 POMT2Q9UKY4 750 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CLEC4AQ9UMR7 237 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 DCHS1Q96JQ0 3298 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 MN1Q10571 1320 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 LRRK1Q38SD2 2015 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SPTBN2O15020 2390 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CABIN1Q9Y6J0 2220 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TMEM131Q92545 1883 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 AKAP13Q12802 2813 aa2.59□□□□□ -2
SKP1-204ENST00000517691 IQANK1A0A1B0GTG1 560 aa2.59□□□□□ -2
SKP1-204ENST00000517691 HTR3EA5X5Y0 456 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MFSD2BA6NFX1 497 aa2.59□□□□□ -2
SKP1-204ENST00000517691 OOEPA6NGQ2 149 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ANXA2P2A6NMY6 339 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CDRT15L2A8MXV6 281 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SUPT3HB4E1H0 165 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TMEM150CB9EJG8 249 aa2.59□□□□□ -2
SKP1-204ENST00000517691 E7ENX8 843 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GOLGA8RI6L899 631 aa2.59□□□□□ -2
SKP1-204ENST00000517691 EBAG9O00559 213 aa2.59□□□□□ -2
SKP1-204ENST00000517691 NVLO15381 856 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 RRP8O43159 456 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 SUPT3HO75486 399 aa2.59□□□□□ -2
SKP1-204ENST00000517691 OR2B3O76000 313 aa2.59□□□□□ -2
SKP1-204ENST00000517691 C1QAP02745 245 aa2.59□□□□□ -2
SKP1-204ENST00000517691 C2P06681 752 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ANXA5P08758 320 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ANKRD34CP0C6C1 535 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC35E2BP0CK96 405 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GFAPP14136 432 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CD1DP15813 335 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MAGP20916 626 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ACHEP22303 614 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PTBP1P26599 531 aaKnown RBP eCLIP2.59□□□□□ -2
SKP1-204ENST00000517691 PTPN6P29350 595 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PEBP1P30086 187 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 CRHR1P34998 444 aa2.59□□□□□ -2
SKP1-204ENST00000517691 HSD17B3P37058 310 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CDKN1AP38936 164 aa2.59□□□□□ -2
SKP1-204ENST00000517691 WNT5AP41221 380 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GDF5P43026 501 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CAMPP49913 170 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ARSFP54793 590 aa2.59□□□□□ -2
SKP1-204ENST00000517691 AP1S2P56377 157 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TBPL1P62380 186 aa2.59□□□□□ -2
SKP1-204ENST00000517691 LIPEQ05469 1076 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MZT1Q08AG7 82 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GRB7Q14451 532 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms