RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 IGDCC3Q8IVU1 814 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 PPIL6Q8IXY8 311 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 OR4K17Q8NGC6 315 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 OR6K3Q8NGY3 331 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 EXT2Q93063 718 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 COL21A1Q96P44 957 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 MTERF1Q99551 399 aaKnown RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 TRAF4Q9BUZ4 470 aaPredicted RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 ZNF717Q9BY31 904 aaPredicted RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 STMN4Q9H169 189 aaPredicted RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 MANSC1Q9H8J5 431 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 CHODLQ9H9P2 273 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 PLAC1Q9HBJ0 212 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 CD274Q9NZQ7 290 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 BCAP29Q9UHQ4 241 aa9.4□□□□□ -0.9
CLDND1-231ENST00000515620 MRPS18CQ9Y3D5 142 aaKnown RBP9.4□□□□□ -0.9
CLDND1-231ENST00000515620 H3BML4 177 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 DLX3O60479 287 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CD8AP01732 235 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 PGRP06401 933 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 IGHV4-31P0DP07 118 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CPMP14384 443 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 PTNP21246 168 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 S1PR1P21453 382 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CFPP27918 469 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CXCR5P32302 372 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 BSGP35613 385 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 XKP51811 444 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CTBP2P56545 445 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 E2F2Q14209 437 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
CLDND1-231ENST00000515620 NCMAPQ5T1S8 102 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 BHLHB9Q6PI77 547 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 FAM111BQ6SJ93 734 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 LRRC70Q7Z2Q7 622 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 ZC3HC1Q86WB0 502 aaKnown RBP9.39□□□□□ -0.91
CLDND1-231ENST00000515620 MYLK4Q86YV6 388 aaPredicted RBP9.39□□□□□ -0.91
CLDND1-231ENST00000515620 TMEM139Q8IV31 216 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 ZNF619Q8N2I2 560 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 OR10H5Q8NGA6 315 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 OR4K14Q8NGD5 310 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 OR5M1Q8NGP8 315 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 TMBIM1Q969X1 311 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 S100PBPQ96BU1 408 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 C11orf24Q96F05 449 aaPredicted RBP9.39□□□□□ -0.91
CLDND1-231ENST00000515620 NAT9Q9BTE0 207 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 DERL2Q9GZP9 239 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 FANCFQ9NPI8 374 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 PLSCR4Q9NRQ2 329 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 CFL2Q9Y281 166 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 PLLPQ9Y342 182 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 ZNF337Q9Y3M9 751 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 PRR14LQ5THK1 2151 aa9.39□□□□□ -0.91
CLDND1-231ENST00000515620 OR6C70A6NIJ9 312 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 REM1O75628 298 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 S100BP04271 92 aaPredicted RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 HK1P19367 917 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 PSMB1P20618 241 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 PIK3CBP42338 1070 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 SLC6A8P48029 635 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 DSCR4P56555 118 aaPredicted RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 OR4D1Q15615 310 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 TSC22D1Q15714 1073 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 SGCBQ16585 318 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 CDKL4Q5MAI5 379 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 FAM120AOSQ5T036 256 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 RNASEH2BQ5TBB1 312 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 GRHL2Q6ISB3 625 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 C12orf54Q6X4T0 127 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 BEND4Q6ZU67 534 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 STK32CQ86UX6 486 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 NUDT13Q86X67 352 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 MEX3DQ86XN8 651 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 ZNF525Q8N782 197 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 PDPRQ8NCN5 879 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 GFM2Q969S9 779 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 MAGOHBQ96A72 148 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 ADOQ96SZ5 270 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 PRRG4Q9BZD6 226 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 CD244Q9BZW8 370 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 TRIM2Q9C040 744 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 OR10A4Q9H209 315 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 DSN1Q9H410 356 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 DDX31Q9H8H2 851 aaKnown RBP9.38□□□□□ -0.91
CLDND1-231ENST00000515620 FOLH1BQ9HBA9 442 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 KCNS2Q9ULS6 477 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 CHMP2BQ9UQN3 213 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
CLDND1-231ENST00000515620 OR2M5A3KFT3 312 aa9.37□□□□□ -0.91
CLDND1-231ENST00000515620 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
CLDND1-231ENST00000515620 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-231ENST00000515620 SCO2O43819 266 aa9.37□□□□□ -0.91
CLDND1-231ENST00000515620 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms