RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 DLX3O60479 287 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 SLU7O95391 586 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 CT62P0C5K7 136 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PYGBP11216 843 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PCNAP12004 261 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 IL11P20809 199 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GPX3P22352 226 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 DPP4P27487 766 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PIK3R1P27986 724 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 HSPA7P48741 367 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 CLDN15P56746 228 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 HMGCS1Q01581 520 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 CALCOCO2Q13137 446 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 HP1BP3Q5SSJ5 553 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 C6orf163Q5TEZ5 329 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 SULT1C3Q6IMI6 304 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 MRM1Q6IN84 353 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 BEND4Q6ZU67 534 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 UBQLNLQ8IYU4 475 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 OR7G3Q8NG95 312 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 OR10H5Q8NGA6 315 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 RAB3IL1Q8TBN0 382 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 IFT81Q8WYA0 676 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 OMA1Q96E52 524 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 LCORQ96JN0 433 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 TMEM79Q9BSE2 394 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 TACO1Q9BSH4 297 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 SORBS1Q9BX66 1292 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 PINK1Q9BXM7 581 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 ALG2Q9H553 416 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 ESRP2Q9H6T0 727 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 NGBQ9NPG2 151 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GRHL1Q9NZI5 618 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 FBXL2Q9UKC9 423 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 EMC9Q9Y3B6 208 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 MEGF8Q7Z7M0 2845 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 IGHV4-30-2A0A087WSY4 118 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 A0A096LNT2 108 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 UQCRHLA0A096LP55 91 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 A0A1W2PR48 441 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 FAM234BA2RU67 622 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 PLPP1O14494 284 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 UBFD1O14562 309 aaKnown RBP10.38□□□□□ -0.75
RNF4-216ENST00000511859 SSX4O60224 188 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 LMX1BO60663 402 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 NDUFS7O75251 213 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 UGT2B11O75310 529 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 CD3EP07766 207 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 NR2F6P10588 404 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 FCGR2AP12318 317 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 S1PR1P21453 382 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 PIK3CBP42338 1070 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 NEK2P51955 445 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 PLTPP55058 493 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 DSCR4P56555 118 aaPredicted RBP10.38□□□□□ -0.75
RNF4-216ENST00000511859 B3GALT5-AS1P59052 145 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 PLCXD2Q0VAA5 305 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
RNF4-216ENST00000511859 CYP20A1Q6UW02 462 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 OR6K3Q8NGY3 331 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 FNDC9Q8TBE3 224 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 ANKRD49Q8WVL7 239 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 ESAMQ96AP7 390 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 NTMT1Q9BV86 223 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 HDHD5Q9BXW7 423 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 ACTR6Q9GZN1 396 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 DDX31Q9H8H2 851 aaKnown RBP10.38□□□□□ -0.75
RNF4-216ENST00000511859 SNX8Q9Y5X2 465 aa10.38□□□□□ -0.75
RNF4-216ENST00000511859 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 OR6C70A6NIJ9 312 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 ELOA3DA6NLF2 546 aaPredicted RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 PGRMC2O15173 223 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 TP73O15350 636 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 CLOCKO15516 846 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 SIX3O95343 332 aaPredicted RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 FAM58BPP0C7Q3 252 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 EPORP19235 508 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 PSMB1P20618 241 aaKnown RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 DRD5P21918 477 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 PTX3P26022 381 aaPredicted RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 CNTFP26441 200 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 XKP51811 444 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 SUCLG1P53597 346 aaKnown RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 RPS3AP61247 264 aaKnown RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 FAPQ12884 760 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 SQLEQ14534 574 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 PON3Q15166 354 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 PGGHGQ32M88 737 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 ELOA3BQ3SY89 546 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 GLE1Q53GS7 698 aaKnown RBP10.37□□□□□ -0.75
RNF4-216ENST00000511859 FBXO48Q5FWF7 155 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 NCMAPQ5T1S8 102 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 OR5M10Q6IEU7 315 aa10.37□□□□□ -0.75
RNF4-216ENST00000511859 OR52E8Q6IFG1 317 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms