RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NOP53Q9NZM5 478 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-213ENST00000509357 ZGRF1Q86YA3 2104 aa8.05□□□□□ -1.12
PDLIM5-213ENST00000509357 MAST4O15021 2626 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 A0A0G2JMM0 328 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 A0A1W2PPB8 328 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 A0A1W2PRS3 328 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 PINLYPA6NC86 204 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TRPC5OSA6NMA1 111 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 C17orf51A8MQB3 221 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 KIR3DP1A8MWS1 328 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 UPK1AO00322 258 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TP53I11O14683 189 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 C6orf47O95873 294 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 CCL3P10147 92 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 PRPS2P11908 318 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 PTPN6P29350 595 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 LSP1P33241 339 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 PIGAP37287 484 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 DCTP40126 519 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 MAP3K8P41279 467 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 GSTM5P46439 218 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 MRPL19P49406 292 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 NCBP2P52298 156 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 GAB1Q13480 694 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 NNATQ16517 81 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 GTDC1Q4AE62 458 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 HSP90B2PQ58FF3 399 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 CMPK2Q5EBM0 449 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 PRAMEF20Q5VT98 475 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 SP5Q6BEB4 398 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 ARHGAP11AQ6P4F7 1023 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 XKRXQ6PP77 449 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TMEM107Q6UX40 140 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 ANKRD46Q86W74 232 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 DOLPP1Q86YN1 238 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 DND1Q8IYX4 353 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 OR52R1Q8NGF1 315 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 SPACA9Q96E40 222 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 OTUB1Q96FW1 271 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 INPP5KQ9BT40 448 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TMEM120AQ9BXJ8 343 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 ITPAQ9BY32 194 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TTTY12Q9BZ98 90 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 OR10A5Q9H207 317 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 IL1RL2Q9HB29 575 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 TCF7L2Q9NQB0 619 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 SDR39U1Q9NRG7 319 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 SH3BP4Q9P0V3 963 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 BOKQ9UMX3 212 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 CFL2Q9Y281 166 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 ZNF835Q9Y2P0 537 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 MEMO1Q9Y316 297 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 DIDO1Q9BTC0 2240 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 NAV2Q8IVL1 2488 aa8.04□□□□□ -1.12
PDLIM5-213ENST00000509357 NPIPA2E9PIF3 369 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 NPIPA3F8WFD2 350 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SLCO1B7G3V0H7 640 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PLOD2O00469 737 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 POLR3GO15318 223 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PDPK1O15530 556 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TGDSO95455 350 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CT45A8P0DMV1 189 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CT45A9P0DMV2 189 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CAPN3P20807 821 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 HTR1EP28566 365 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 MAGEA5P43359 124 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ASMTP46597 345 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TMED10P49755 219 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CORO7P57737 925 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 HBA1P69905 142 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 RPP38P78345 283 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PSG6Q00889 435 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 HSPB3Q12988 150 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ART3Q13508 389 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SLC10A1Q14973 349 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ZNF791Q3KP31 576 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 FAM174BQ3ZCQ3 159 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PDCD4Q53EL6 469 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CT45A2Q5DJT8 189 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 NXNQ6DKJ4 435 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 Q6ZPB1 254 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SPATA19Q7Z5L4 167 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 MSRB3Q8IXL7 192 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SAMD14Q8IZD0 417 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SLC34A3Q8N130 599 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 OR2L13Q8N349 312 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 FAM109AQ8N4B1 249 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TMEM251Q8N6I4 163 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 OR10G3Q8NGC4 313 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 OR4N2Q8NGD1 307 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CEP70Q8NHQ1 597 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms