RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 WDR92Q96MX6 357 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SLC38A1Q9H2H9 487 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CLN6Q9NWW5 311 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ACAD8Q9UKU7 415 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SNX7Q9UNH6 387 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 GPR52Q9Y2T5 361 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 TCRBV21S2A2A0A5A6 115 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 A8MVJ9 347 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 FAAHO00519 579 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 LRRTM2O43300 516 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 HCRTR1O43613 425 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 LDB3O75112 727 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 OXSR1O95747 527 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 LGI1O95970 557 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CTSBP07858 339 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 FHP07954 510 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 RCVRNP35243 200 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 LTBRP36941 435 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ILKQ13418 452 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 RUNX2Q13950 521 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 BCL2A1Q16548 175 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ALG11Q2TAA5 492 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SLC35A4Q96G79 324 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 MGLLQ99685 303 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 RERGLQ9H628 205 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SIAEQ9HAT2 523 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CCDC59Q9P031 241 aaKnown RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 UGT2A1Q9Y4X1 527 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ZNF780BQ9Y6R6 833 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 ALOX12P18054 663 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 LRIT3Q3SXY7 679 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 CLEC12AQ5QGZ9 265 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 ASPGQ86U10 573 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 SLC34A3Q8N130 599 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 Q8N9G6 341 aaPredicted RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 GIMAP5Q96F15 307 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 TXNDC15Q96J42 360 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 DHRS1Q96LJ7 313 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 MGAT4BQ9UQ53 548 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 NCKAP1Q9Y2A7 1128 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 DMDP11532 3685 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 SAGE2PA6NJ88 616 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 KIAA0513O60268 411 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 NR2F6P10588 404 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 UGT2B7P16662 529 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 PRKCDQ05655 676 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 SSX1Q16384 188 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 TRMT12Q53H54 448 aaKnown RBP13.59□□□□□ -0.23
DDX41-208ENST00000507955 PLAG1Q6DJT9 500 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 FCRL6Q6DN72 434 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 CASP12Q6UXS9 341 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 Q6ZSR6 202 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 CELF2-AS1Q8N7Q2 184 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 MORN4Q8NDC4 146 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 CDS1Q92903 461 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 C10orf90Q96M02 699 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 OR2A5Q96R48 311 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 SEMA4GQ9NTN9 838 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 A3GALT2U3KPV4 340 aa13.59□□□□□ -0.23
DDX41-208ENST00000507955 A0A087WUU8 490 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.24
DDX41-208ENST00000507955 CTDSP2O14595 271 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SNPHO15079 494 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 EMC8O43402 210 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 CPN2P22792 545 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SOX18P35713 384 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SRP54P61011 504 aaKnown RBP13.58□□□□□ -0.24
DDX41-208ENST00000507955 TGM3Q08188 693 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 C1orf61Q13536 156 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 GINS1Q14691 196 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SLC7A5P1Q8MH63 180 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SLC22A18ASQ8N1D0 253 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 TMEM52Q8NDY8 209 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 KBTBD8Q8NFY9 601 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 OR13H1Q8NG92 308 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 ZNF764Q96H86 408 aaPredicted RBP13.58□□□□□ -0.24
DDX41-208ENST00000507955 SLC25A19Q9HC21 320 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 SLC9A8Q9Y2E8 581 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 CARD8Q9Y2G2 431 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 PCDHGB6Q9Y5F9 930 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
DDX41-208ENST00000507955 CH25HO95992 272 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms