RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 TRIM8Q9BZR9 551 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 GLIPR2Q9H4G4 154 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 METTL7AQ9H8H3 244 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 FOLH1BQ9HBA9 442 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 MIEF1Q9NQG6 463 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 ACAD8Q9UKU7 415 aa12.5□□□□□ -0.41
HOXC6-203ENST00000504315 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 LSM1O15116 133 aaKnown RBP12.49□□□□□ -0.41
HOXC6-203ENST00000504315 RGS14O43566 566 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 ICOSLGO75144 302 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 COQ9O75208 318 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 SEC22BO75396 215 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 ERN1O75460 977 aaKnown RBP12.49□□□□□ -0.41
HOXC6-203ENST00000504315 GLI4P10075 376 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 COX6B1P14854 86 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 CREB1P16220 341 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 SDC1P18827 310 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 NTSP30990 170 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 SERPINB5P36952 375 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 ETV4P43268 484 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 NCBP2P52298 156 aaKnown RBP eCLIP12.49□□□□□ -0.41
HOXC6-203ENST00000504315 PNLIPRP2P54317 469 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 CORO7P57737 925 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 PSG6Q00889 435 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 C1orf185Q5T7R7 199 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 GDF7Q7Z4P5 450 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 LIX1Q8N485 282 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 OR1J4Q8NGS1 313 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 HOXB13Q92826 284 aaPredicted RBP12.49□□□□□ -0.41
HOXC6-203ENST00000504315 TMBIM1Q969X1 311 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 EGLN2Q96KS0 407 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 AMDHD1Q96NU7 426 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 COL21A1Q96P44 957 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 MECRQ9BV79 373 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 EXO5Q9H790 373 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 RAB21Q9UL25 225 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 C19orf53Q9UNZ5 99 aaPredicted RBP12.49□□□□□ -0.41
HOXC6-203ENST00000504315 TMED5Q9Y3A6 229 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 SPG11Q96JI7 2443 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 CSMD1Q96PZ7 3565 aa12.49□□□□□ -0.41
HOXC6-203ENST00000504315 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 ABCA4P78363 2273 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 PRAMEF25A6NGN4 478 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 UPK1AO00322 258 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 GNB5O14775 395 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 SPAG7O75391 227 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 TOXO94900 526 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 CHEK2O96017 543 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 JUNP05412 331 aaKnown RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 ARRB2P32121 409 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 MC3RP41968 323 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 FRKP42685 505 aaPredicted RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 PDE7AQ13946 482 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 EFR3AQ14156 821 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 ARL13AQ5H913 290 aaPredicted RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 RIPPLY2Q5TAB7 128 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 TMEM107Q6UX40 140 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 ULK2Q8IYT8 1036 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 CDC26Q8NHZ8 85 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 TWIST2Q8WVJ9 160 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 TMCO6Q96DC7 493 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 C14orf79Q96F83 325 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 TIMP4Q99727 224 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 PRDM14Q9GZV8 571 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 WIF1Q9Y5W5 379 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 V9GYY5 206 aaPredicted RBP12.48□□□□□ -0.41
HOXC6-203ENST00000504315 AKAP6Q13023 2319 aa12.48□□□□□ -0.41
HOXC6-203ENST00000504315 PDZD2O15018 2839 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 C15orf38-AP3S2A0A0A6YYH1 394 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 TMEM233B4DJY2 109 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 FAM47E-STBD1D6RA91 191 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 NME6O75414 186 aaPredicted RBP12.47□□□□□ -0.41
HOXC6-203ENST00000504315 REM1O75628 298 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 BPGMP07738 259 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 MSX1P28360 303 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 ADH7P40394 386 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 ZFP36L2P47974 494 aaKnown RBP12.47□□□□□ -0.41
HOXC6-203ENST00000504315 TRPC1P48995 793 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 GAS1P54826 345 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 ZNF844Q08AG5 666 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 XKR7Q5GH72 579 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 VASNQ6EMK4 673 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 ANGPTL8Q6UXH0 198 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
HOXC6-203ENST00000504315 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms