RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TSPAN18Q96SJ8 248 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 ISG20L2Q9H9L3 353 aaKnown RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 PIGVQ9NUD9 493 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 ARGLU1Q9NWB6 273 aaPredicted RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 ENTPD4Q9Y227 616 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 DHRS7Q9Y394 339 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 ZNF175Q9Y473 711 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 SNX5Q9Y5X3 404 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 C5orf51A6NDU8 294 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 B4DXG7 233 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 FOXH1O75593 365 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 IGHV3-23P01764 117 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 CENPBP07199 599 aaPredicted RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 ZNF18P17022 549 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 IL2RGP31785 369 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 EFNA3P52797 238 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 UCP2P55851 309 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 IL9RQ01113 521 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 PDE7AQ13946 482 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 PRR4Q16378 134 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 ZNF658BQ4V348 819 aaPredicted RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 PRR5LQ6MZQ0 368 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 SCARA5Q6ZMJ2 495 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 TSEN54Q7Z6J9 526 aaKnown RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 CEND1Q8N111 149 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 TMEM37Q8WXS4 190 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 PTP4A1Q93096 173 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 ELSPBP1Q96BH3 223 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 C11orf24Q96F05 449 aaPredicted RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 EEF2KMTQ96G04 330 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 C16orf74Q96GX8 76 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 SLC5A7Q9GZV3 580 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 MMADHCQ9H3L0 296 aaPredicted RBP2.29□□□□□ -2.04
SMC4-227ENST00000497984 COMMD8Q9NX08 183 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 LHX3Q9UBR4 397 aa2.29□□□□□ -2.04
SMC4-227ENST00000497984 ARHGAP23Q9P227 1491 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 SMIM30A4D0T7 59 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 LRIT2A6NDA9 550 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 LATO43561 262 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 FMO6PO60774 539 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 ATP6V1G1O75348 118 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 ACTL6AO96019 429 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 CPN1P15169 458 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 AREGP15514 252 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 UGT1A6P19224 532 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 MUTP22033 750 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 IDSP22304 550 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 NPY2RP49146 381 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 SLC26A2P50443 739 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 NME5P56597 212 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 EIF2B1Q14232 305 aaKnown RBP2.28□□□□□ -2.04
SMC4-227ENST00000497984 CAMK4Q16566 473 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 CLPPQ16740 277 aaPredicted RBP2.28□□□□□ -2.04
SMC4-227ENST00000497984 SLC39A12Q504Y0 691 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 DPY19L2P2Q6ZN68 376 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 MOB1BQ7L9L4 216 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 PRSS48Q7RTY5 328 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 ANKRD23Q86SG2 305 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 ZNF410Q86VK4 478 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 UNC45BQ8IWX7 931 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 C10orf53Q8N6V4 93 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 MLKLQ8NB16 471 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 EHD1Q9H4M9 534 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 FAM124BQ9H5Z6 455 aaPredicted RBP2.28□□□□□ -2.04
SMC4-227ENST00000497984 TRMT6Q9UJA5 497 aaKnown RBP2.28□□□□□ -2.04
SMC4-227ENST00000497984 BARX2Q9UMQ3 279 aaPredicted RBP2.28□□□□□ -2.04
SMC4-227ENST00000497984 KLHDC2Q9Y2U9 406 aa2.28□□□□□ -2.04
SMC4-227ENST00000497984 NPC1L1Q9UHC9 1359 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 A0A0J9YVX5 310 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 FAM231BA6NCW3 169 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 RAMP1O60894 148 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 SYNGR4O95473 234 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 IGSF6O95976 241 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 RPA1P27694 616 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 CTNNA1P35221 906 aaKnown RBP2.27□□□□□ -2.05
SMC4-227ENST00000497984 STK19P49842 368 aaPredicted RBP2.27□□□□□ -2.05
SMC4-227ENST00000497984 SGSHP51688 502 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 SSTP61278 116 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 MEDAGQ5VYS4 303 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 IYDQ6PHW0 289 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 SERPINA12Q8IW75 414 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 C9orf40Q8IXQ3 194 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 RNF175Q8N4F7 328 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 OR52J3Q8NH60 311 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 ZNF184Q99676 751 aaPredicted RBP2.27□□□□□ -2.05
SMC4-227ENST00000497984 APOOQ9BUR5 198 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 NMUR2Q9GZQ4 415 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 ALG9Q9H6U8 611 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 PRMT8Q9NR22 394 aaPredicted RBP2.27□□□□□ -2.05
SMC4-227ENST00000497984 MBD2Q9UBB5 411 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 MIOXQ9UGB7 285 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 SLC2A6Q9UGQ3 507 aa2.27□□□□□ -2.05
SMC4-227ENST00000497984 A0A1W2PRV1 198 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 TRIM49D1C9J1S8 452 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 TOXO94900 526 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 SDC1P18827 310 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 UGT1A3P35503 534 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 ACVR1BP36896 505 aa2.26□□□□□ -2.05
SMC4-227ENST00000497984 TRPC1P48995 793 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms