RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 SHISA9B4DS77 424 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 ABCD4O14678 606 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 RAMP1O60894 148 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 WDR47O94967 919 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 SYNGR4O95473 234 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 AIFM1O95831 613 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 HK1P19367 917 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 PTGDSP41222 190 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 SLC1A2P43004 574 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 SUCLG1P53597 346 aaKnown RBP10.4□□□□□ -0.74
ATG3-209ENST00000496423 HMGCS1Q01581 520 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 KLF1Q13351 362 aaPredicted RBP10.4□□□□□ -0.74
ATG3-209ENST00000496423 SLMAPQ14BN4 828 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 CARTPTQ16568 116 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 PAGE2BQ5JRK9 111 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 OR4C11Q6IEV9 310 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 ZNF619Q8N2I2 560 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 LINC01356Q8N9X3 169 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 TRIM58Q8NG06 486 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.74
ATG3-209ENST00000496423 EHD1Q9H4M9 534 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 PTGES2Q9H7Z7 377 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 FOLH1BQ9HBA9 442 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 ABHD10Q9NUJ1 306 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 GPRC5BQ9NZH0 403 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 FBXL2Q9UKC9 423 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 FBXO5Q9UKT4 447 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 ZNF337Q9Y3M9 751 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.74
ATG3-209ENST00000496423 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATG3-209ENST00000496423 H3BML4 177 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 LIASO43766 372 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 AQP8O94778 261 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 SCELO95171 688 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 CLPSP04118 112 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 COL6A2P12110 1019 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 ETS1P14921 441 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 EPB42P16452 691 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 CNTFP26441 200 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 PIK3R1P27986 724 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 KRT20P35900 424 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 TNFRSF17Q02223 184 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 GANABQ14697 944 aaKnown RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 P2RY6Q15077 328 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 SPA17Q15506 151 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 SHQ1Q6PI26 577 aaKnown RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 TBC1D1Q86TI0 1168 aaPredicted RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 METTL25Q8N6Q8 603 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 ADCY4Q8NFM4 1077 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 ALG3Q92685 438 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 HPS1Q92902 700 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 UBE2E3Q969T4 207 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 ZNF669Q96BR6 464 aaPredicted RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 PTCD3Q96EY7 689 aaKnown RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 SERPINB12Q96P63 405 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 FAM167BQ9BTA0 163 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 TRMOQ9BU70 441 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 EFCAB11Q9BUY7 163 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 NXF5Q9H1B4 397 aaKnown RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 C12orf49Q9H741 205 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 CXorf21Q9HAI6 301 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 SDHAF3Q9NRP4 125 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 C20orf96Q9NUD7 363 aaPredicted RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 CLEC4AQ9UMR7 237 aa10.39□□□□□ -0.75
ATG3-209ENST00000496423 WBP11Q9Y2W2 641 aaKnown RBP10.39□□□□□ -0.75
ATG3-209ENST00000496423 RTCAO00442 366 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 SMAD9O15198 467 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 REM1O75628 298 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 PABPC4LP0CB38 370 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 GRK2P25098 689 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 RAP1GDS1P52306 607 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 CHN2P52757 468 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 B3GALT5-AS1P59052 145 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 HILS1P60008 231 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 CDKL1Q00532 357 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 EFR3AQ14156 821 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 ACAP2Q15057 778 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 PPA1Q15181 289 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 OASLQ15646 514 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 TMEM201Q5SNT2 666 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 OR5M10Q6IEU7 315 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 ZNF544Q6NX49 715 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 SLC22A25Q6T423 547 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 TMEM108Q6UXF1 575 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 RINLQ6ZS11 566 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 ZNF615Q8N8J6 731 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 NUP43Q8NFH3 380 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 OR52B6Q8NGF0 335 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 ATG4AQ8WYN0 398 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 RGMAQ96B86 450 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 CMTM7Q96FZ5 175 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 FOXN4Q96NZ1 517 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 COL21A1Q96P44 957 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
ATG3-209ENST00000496423 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
ATG3-209ENST00000496423 MED29Q9NX70 200 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms