RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ANKMY1Q9P2S6 941 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CA5BQ9Y2D0 317 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 A0A087WUU8 490 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 PNMA8CA0A1B0GUJ8 204 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 PRKYO43930 277 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 MED26O95402 600 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 RAB36O95755 333 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 UGT2B7P16662 529 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ACSL1P33121 698 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 MAGEA10P43363 369 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SRP54P61011 504 aaKnown RBP10.38□□□□□ -0.75
CMSS1-208ENST00000496116 YPEL5P62699 121 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 PRKCDQ05655 676 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 LTB4RQ15722 352 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SSX1Q16384 188 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SNAPC1Q16533 368 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF181Q2M3W8 571 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 DEFB134Q4QY38 66 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 KLHL22Q53GT1 634 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SOWAHCQ53LP3 525 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-208ENST00000496116 HEPHL1Q6MZM0 1159 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 MFSD12Q6NUT3 480 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SLC27A4Q6P1M0 643 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 NANOGP1Q8N7R0 232 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 OR52P1PQ8NH57 321 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ZCCHC10Q8TBK6 192 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ZFPM2Q8WW38 1151 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SLC38A2Q96QD8 506 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 TEX12Q9BXU0 123 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 RNF167Q9H6Y7 350 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ANKRA2Q9H9E1 313 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 DIMT1Q9UNQ2 313 aaKnown RBP10.38□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 DOLKQ9UPQ8 538 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 LSM2Q9Y333 95 aaKnown RBP10.38□□□□□ -0.75
CMSS1-208ENST00000496116 SCN3AQ9NY46 2000 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 F5P12259 2224 aa10.38□□□□□ -0.75
CMSS1-208ENST00000496116 A6NCN8 305 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CPSF4LA6NMK7 179 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 FAM170BA6NMN3 283 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 UPK1BO75841 260 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SMIM10L1P0DMW3 83 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CKMT1AP12532 417 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PORP16435 677 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ENDOUP21128 410 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TGM1P22735 817 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 AKT2P31751 481 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 AVPR1BP47901 424 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 RGS8P57771 180 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 RELAQ04206 551 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TSPAN31Q12999 210 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 HTR4Q13639 388 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SYT14P1Q58G82 188 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 C6orf132Q5T0Z8 1188 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TRIM73Q86UV7 250 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PEX5LQ8IYB4 626 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CLIP4Q8N3C7 705 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF655Q8N720 491 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 OR7G2Q8NG99 324 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 FLVCR1-AS1Q8TAF5 88 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PIGXQ8TBF5 258 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SLC9A6Q92581 669 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 RERGQ96A58 199 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SLC35A4Q96G79 324 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SMIM10Q96HG1 83 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SLC6A18Q96N87 628 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 POLR2J2Q9GZM3 115 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 NUAK2Q9H093 628 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 MTHFD2LQ9H903 347 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PTGFRNQ9P2B2 879 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SEC14L4Q9UDX3 406 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CLEC2DQ9UHP7 191 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 DAPP1Q9UN19 280 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SPACA6W5XKT8 324 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 KRBA1A5PL33 1030 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 OR6C74A6NCV1 312 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ZSCAN9O15535 394 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 MYL12AP19105 171 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 POLR2CP19387 275 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CD97P48960 835 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TPMTP51580 245 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PDX1P52945 283 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 RPS3AP61247 264 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 GPR18Q14330 331 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 LARS2Q15031 903 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 EOGTQ5NDL2 527 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ACSM5Q6NUN0 579 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 FIGLAQ6QHK4 219 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 FAM111BQ6SJ93 734 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SLC36A4Q6YBV0 504 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 RASSF6Q6ZTQ3 369 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 PLEKHM3Q6ZWE6 761 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 USP53Q70EK8 1073 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms