RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GRHL3Q8TE85 626 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 SLC9A6Q92581 669 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 JADE3Q92613 823 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 TMBIM1Q969X1 311 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 CCDC115Q96NT0 180 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 LMF2Q9BU23 707 aaKnown RBP11.49□□□□□ -0.57
TRA2A-209ENST00000494255 RMND5AQ9H871 391 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 CNIH4Q9P003 139 aa11.49□□□□□ -0.57
TRA2A-209ENST00000494255 FAF1Q9UNN5 650 aaPredicted RBP11.49□□□□□ -0.57
TRA2A-209ENST00000494255 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 RNF103-CHMP3A0A140T963 221 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 ABCB7O75027 752 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 HMGN2P05204 90 aaKnown RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 CCL3P10147 92 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 CNR1P21554 472 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 UQCRC2P22695 453 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 GABRA3P34903 492 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 MEOX1P50221 254 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 KCNK10P57789 538 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 GPR85P60893 370 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.571e-9■□□□□ 8.3
TRA2A-209ENST00000494255 EFR3AQ14156 821 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 LASP1Q14847 261 aaKnown RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 DECR1Q16698 335 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 TIGD2Q4W5G0 525 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 GK5Q6ZS86 529 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 MSANTD1Q6ZTZ1 278 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 NUP54Q7Z3B4 507 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 SULF2Q8IWU5 870 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 GPR151Q8TDV0 419 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 DIO2Q92813 273 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 GIMAP5Q96F15 307 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 COL21A1Q96P44 957 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 SECISBP2Q96T21 854 aaKnown RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 FAM173AQ9BQD7 235 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 YIPF4Q9BSR8 244 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 ASF1BQ9NVP2 202 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 CCDC167Q9P0B6 97 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 CBLCQ9ULV8 474 aa11.48□□□□□ -0.57
TRA2A-209ENST00000494255 CHCHD2Q9Y6H1 151 aaPredicted RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 NUP214P35658 2090 aaPredicted RBP11.48□□□□□ -0.57
TRA2A-209ENST00000494255 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 G3V3Y1 287 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 SOX30O94993 753 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 KCNH1O95259 989 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 ACP2P11117 423 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 CHI3L1P36222 383 aaPredicted RBP11.47□□□□□ -0.57
TRA2A-209ENST00000494255 PSMD4P55036 377 aaKnown RBP11.47□□□□□ -0.57
TRA2A-209ENST00000494255 PMP22Q01453 160 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 PLGLB1Q02325 96 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 GAB1Q13480 694 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 AGKQ53H12 422 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 FBXW8Q8N3Y1 598 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 POGLUT1Q8NBL1 392 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 OR2M7Q8NG81 312 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 FBXO30Q8TB52 745 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 SPPL2AQ8TCT8 520 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 ITCHQ96J02 903 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 TAAR6Q96RI8 345 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 ACTRT3Q9BYD9 372 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 NSRP1Q9H0G5 558 aaKnown RBP11.47□□□□□ -0.57
TRA2A-209ENST00000494255 METTL7AQ9H8H3 244 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 OLAHQ9NV23 265 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 MRGBPQ9NV56 204 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
TRA2A-209ENST00000494255 ASPDHA6ND91 283 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 CCDC154A6NI56 674 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 OR6C70A6NIJ9 312 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 NR5A2O00482 541 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 RFXANKO14593 260 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 HS6ST1O60243 411 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 NKX2-2O95096 273 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ANP32DO95626 131 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 LSP1P33241 339 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 PIGAP37287 484 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ZFP36L2P47974 494 aaKnown RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 PNLIPRP2P54317 469 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 GYS2P54840 703 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 KCNJ2P63252 427 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ALDH6A1Q02252 535 aaKnown RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 TBCELQ5QJ74 424 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 CDC73Q6P1J9 531 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 C6orf120Q7Z4R8 191 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 CPSF7Q8N684 471 aaKnown RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 COX18Q8N8Q8 333 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms