RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TROVE2P10155 538 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CYP4B1P13584 511 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 MAGEA12P43365 314 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 PPICP45877 212 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CCNG1P51959 295 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF136P52737 540 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 DGKQP52824 942 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ROR2Q01974 943 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 PRICKLE4Q2TBC4 344 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 MROH9Q5TGP6 573 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ENPP6Q6UWR7 440 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ADGRE4PQ86SQ3 457 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 OR1J4Q8NGS1 313 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 LILRB1Q8NHL6 650 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 NRGNQ92686 78 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 WNT2BQ93097 391 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 HGDQ93099 445 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CTHRC1Q96CG8 243 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 LCORQ96JN0 433 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 DACH2Q96NX9 599 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 C1QTNF3Q9BXJ4 246 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 OR2B2Q9GZK3 357 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ELOVL6Q9H5J4 265 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ACSS3Q9H6R3 686 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 METTL7AQ9H8H3 244 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CES1P1Q9UKY3 287 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 EXO1Q9UQ84 846 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 CAMK2AQ9UQM7 478 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 NIPBLQ6KC79 2804 aaeCLIP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ANKHD1Q8IWZ3 2542 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 OR6C70A6NIJ9 312 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 ICOSLGO75144 302 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SMIM24O75264 130 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 ERN1O75460 977 aaKnown RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 ATE1O95260 518 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SIX3O95343 332 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 OTCP00480 354 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 CRHP06850 196 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 KLK1P06870 262 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 CT62P0C5K7 136 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 HSD3B1P14060 373 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 RAC2P15153 192 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 NT5EP21589 574 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 TACR1P25103 407 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 CNTFP26441 200 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 GMPRP36959 345 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 RANBP1P43487 201 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SERPINB9P50453 376 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 MAPK12P53778 367 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 NAGLUP54802 743 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 MRPS25P82663 173 aaKnown RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 IRF9Q00978 393 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 MGAT2Q10469 447 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 BCL2A1Q16548 175 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 DEFB113Q30KQ7 82 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 TECRLQ5HYJ1 363 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 AAGABQ6PD74 315 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 TAOK1Q7L7X3 1001 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 MILR1Q7Z6M3 343 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 BIVMQ86UB2 503 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 PTGR2Q8N8N7 351 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 FAM83FQ8NEG4 500 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 OR52B6Q8NGF0 335 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 PPP1R14CQ8TAE6 165 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF675Q8TD23 568 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SMPDL3BQ92485 455 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SLC35A4Q96G79 324 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 FAIM2Q9BWQ8 316 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 OSBPL11Q9BXB4 747 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 NXF5Q9H1B4 397 aaKnown RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 PLEKHF2Q9H8W4 249 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 BEX4Q9NWD9 120 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 MAT2BQ9NZL9 334 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 PCTPQ9UKL6 214 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 NFU1Q9UMS0 254 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SNX6Q9UNH7 406 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 RPH3AQ9Y2J0 694 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
HDAC3-212ENST00000492407 INTS1Q8N201 2190 aaKnown RBP8.32□□□□□ -1.08
HDAC3-212ENST00000492407 FRG2CA6NGY1 282 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 LRRC14BA6NHZ5 514 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 CLCA1A8K7I4 914 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 GBAP04062 536 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 TMIGD3P0DMS9 266 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 DRD2P14416 443 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 SRD5A2P31213 254 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 GSTM5P46439 218 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 DIO3P55073 304 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 GFRA1P56159 465 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 TUBA4AP68366 448 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ADAM8P78325 824 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 MRPS22P82650 360 aaKnown RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 OCRLQ01968 901 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms