RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LRRC1Q9BTT6 524 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 ANKRA2Q9H9E1 313 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 PSME2Q9UL46 239 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 TMCO1Q9UM00 188 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 WIF1Q9Y5W5 379 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF780BQ9Y6R6 833 aa14.38□□□□□ -0.11
PLOD3-216ENST00000489927 ESYT3A0FGR9 886 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 B4DXG7 233 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 SIAH2O43255 324 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 ARHGEF9O43307 516 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 SMIM24O75264 130 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 REM1O75628 298 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 RPS17P08708 135 aaKnown RBP14.37□□□□□ -0.11
PLOD3-216ENST00000489927 CT45A8P0DMV1 189 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 CT45A9P0DMV2 189 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 TSPAN8P19075 237 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 TCEA1P23193 301 aaKnown RBP14.37□□□□□ -0.11
PLOD3-216ENST00000489927 MAGEA12P43365 314 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 CORO7P57737 925 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 EEF1A1P68104 462 aaKnown RBP14.37□□□□□ -0.11
PLOD3-216ENST00000489927 FAM27E3Q08E93 113 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 CT45A2Q5DJT8 189 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF628Q5EBL2 1059 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 EEF1A1P5Q5VTE0 462 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 LETMD1Q6P1Q0 360 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 C1orf52Q8N6N3 182 aaKnown RBP14.37□□□□□ -0.11
PLOD3-216ENST00000489927 SELENOMQ8WWX9 145 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 BTBD9Q96Q07 612 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 HBEGFQ99075 208 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 FAIM2Q9BWQ8 316 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 BRF2Q9HAW0 419 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 HEY2Q9UBP5 337 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 DKKL1Q9UK85 242 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 UTS2RQ9UKP6 389 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 DLGAP4Q9Y2H0 992 aa14.37□□□□□ -0.11
PLOD3-216ENST00000489927 C17orf51A8MQB3 221 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 DEFB108AA8MXU0 73 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 MSTNO14793 375 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 CTIFO43310 598 aaKnown RBP14.36□□□□□ -0.11
PLOD3-216ENST00000489927 HCRTR2O43614 444 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 ZIC3O60481 467 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 TSPAN2O60636 221 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 ABCB7O75027 752 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 SMNDC1O75940 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
PLOD3-216ENST00000489927 LY6G6DO95868 133 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 OTCP00480 354 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 CDH13P55290 713 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 VWA1Q6PCB0 445 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 P3H2Q8IVL5 708 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 CCDC116Q8IYX3 515 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 CIARTQ8N365 385 aaPredicted RBP14.36□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF483Q8TF39 744 aaPredicted RBP14.36□□□□□ -0.11
PLOD3-216ENST00000489927 STARD4Q96DR4 205 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 WFIKKN1Q96NZ8 548 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 PIP5K1AQ99755 562 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 ACSS3Q9H6R3 686 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 KLHL28Q9NXS3 571 aa14.36□□□□□ -0.11
PLOD3-216ENST00000489927 MRPS18CQ9Y3D5 142 aaKnown RBP14.36□□□□□ -0.11
PLOD3-216ENST00000489927 FAM171A2A8MVW0 826 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 SMPD2O60906 423 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 ESRRBO95718 433 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 GRK2P25098 689 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 DPP4P27487 766 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 PHBP35232 272 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 GAS1P54826 345 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 B3GALT5-AS1P59052 145 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 TRA2BP62995 288 aaKnown RBP14.35□□□□□ -0.11
PLOD3-216ENST00000489927 SLC7A5Q01650 507 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 TCHHL1Q5QJ38 904 aaPredicted RBP14.35□□□□□ -0.11
PLOD3-216ENST00000489927 NPSR1Q6W5P4 371 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 LARP4Q71RC2 724 aaKnown RBP eCLIP14.35□□□□□ -0.11
PLOD3-216ENST00000489927 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 LRRC75A-AS1Q8N1F1 130 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 CNEP1R1Q8N9A8 125 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 OR9A2Q8NGT5 310 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF675Q8TD23 568 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 RNF138Q8WVD3 245 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 KAT2AQ92830 837 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 PIGTQ969N2 578 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 COX4I2Q96KJ9 171 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 VSTM2LQ96N03 204 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 PFDN4Q9NQP4 134 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 ZDHHC18Q9NUE0 388 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 NMRK1Q9NWW6 199 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 NINJ2Q9NZG7 142 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF225Q9UK10 706 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
PLOD3-216ENST00000489927 SLC22A20A6NK97 555 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 H7C1Q1 480 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 BCAS2O75934 225 aaPredicted RBP14.34□□□□□ -0.11
PLOD3-216ENST00000489927 CRHP06850 196 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 IL12BP29460 328 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 KRT20P35900 424 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 MC3RP41968 323 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 EFR3AQ14156 821 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 BCL2A1Q16548 175 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 OR2A2Q6IF42 318 aa14.34□□□□□ -0.11
PLOD3-216ENST00000489927 ZNF474Q6S9Z5 364 aaPredicted RBP14.34□□□□□ -0.11
PLOD3-216ENST00000489927 TAOK1Q7L7X3 1001 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms