RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SSX8Q7RTT4 187 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 C17orf47Q8NEP4 570 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 TRIM58Q8NG06 486 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 HGDQ93099 445 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 ADIPOR1Q96A54 375 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 OMA1Q96E52 524 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 SNX18Q96RF0 628 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 CCT8L2Q96SF2 557 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 VRK1Q99986 396 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-233ENST00000489352 OR10A5Q9H207 317 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 FBXO6Q9NRD1 293 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-233ENST00000489352 EHD3Q9NZN3 535 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 B4DSR2 109 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 GCM2O75603 506 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 GPR75O95800 540 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 AIFM1O95831 613 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 IFNB1P01574 187 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 DHRS4L1P0CG22 281 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 ATP5A1P25705 553 aaKnown RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 IL2RGP31785 369 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SSR2P43308 183 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 HNRNPH2P55795 449 aaKnown RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 KIF5AQ12840 1032 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 ITGADQ13349 1161 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 NR1I3Q14994 352 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SLMAPQ14BN4 828 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 TMEM201Q5SNT2 666 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 ZNF549Q6P9A3 640 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 KLHL17Q6TDP4 642 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 C1QL4Q86Z23 238 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 GALNT12Q8IXK2 581 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 BPIFB2Q8N4F0 458 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SPATA6LQ8N4H0 392 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 ADCY4Q8NFM4 1077 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 OR52B6Q8NGF0 335 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 LINGO1Q96FE5 620 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 NAT10Q9H0A0 1025 aaKnown RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SAP130Q9H0E3 1048 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SLITRK2Q9H156 845 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 NXF5Q9H1B4 397 aaKnown RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 PAQR5Q9NXK6 330 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-233ENST00000489352 MED16Q9Y2X0 877 aa10.2□□□□□ -0.78
HDAC6-233ENST00000489352 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 EIF1AYO14602 144 aaKnown RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 CLGNO14967 610 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 UGT2B11O75310 529 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 CLPSP04118 112 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 HIST1H1TP22492 207 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 GRK2P25098 689 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 STIP1P31948 543 aaKnown RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 GALNSP34059 522 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 PTPN7P35236 360 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 BUD31P41223 144 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 SLC6A8P48029 635 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 IL13RA1P78552 427 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 SLAMF1Q13291 335 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 RBMS3Q6XE24 437 aaKnown RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 GPR180Q86V85 440 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 GABRG1Q8N1C3 465 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 METTL25Q8N6Q8 603 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 UBE2FQ969M7 185 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 KIFC1Q9BW19 673 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 PITHD1Q9GZP4 211 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-233ENST00000489352 MMP27Q9H306 513 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 NT5DC2Q9H857 520 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 MYNNQ9NPC7 610 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 SMYD2Q9NRG4 433 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 HIF1ANQ9NWT6 349 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 TAS2R13Q9NYV9 303 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 PHF11Q9UIL8 331 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 CFL2Q9Y281 166 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 ATP23Q9Y6H3 246 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 PCNX3Q9H6A9 2034 aa10.19□□□□□ -0.78
HDAC6-233ENST00000489352 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 ACOX3O15254 700 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 NDUFB5O43674 189 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 F7P08709 466 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 SLC35E2BP0CK96 405 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 SLC35E2P0CK97 266 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 PTAFRP25105 342 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 AGTR1P30556 359 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 APOBEC3AP31941 199 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 RWDD2BP57060 319 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 CCNIQ14094 377 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 TSNAXIP1Q2TAA8 658 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 FAHD2BQ6P2I3 314 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 SLC46A3Q7Z3Q1 461 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 CEP112Q8N8E3 955 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 OR5M1Q8NGP8 315 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 ZBTB8AQ96BR9 441 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 MTBPQ96DY7 904 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 FBXO17Q96EF6 278 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 FAHD2AQ96GK7 314 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 REXO5Q96IC2 774 aaKnown RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 CCDC42Q96M95 316 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 COL21A1Q96P44 957 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 SORCS2Q96PQ0 1159 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 HBEGFQ99075 208 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 INPP5KQ9BT40 448 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms