RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 EFNA1P20827 205 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ZNF10P21506 573 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 NTSP30990 170 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CHI3L1P36222 383 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CRATP43155 626 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 XCR1P46094 333 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 KCNJ5P48544 419 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CCT3P49368 545 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 MAN2A2P49641 1150 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PRIM2P49643 509 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 HLCSP50747 726 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CDK9P50750 372 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ANXA11P50995 505 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PLA2G16P53816 162 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 IST1P53990 364 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 RAD23AP54725 363 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 GABARAPL2P60520 117 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CXCR4P61073 352 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TNFRSF17Q02223 184 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 SLAMF1Q13291 335 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 GNA13Q14344 377 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ELOCQ15369 112 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 INAVAQ3KP66 663 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TMEM31Q5JXX7 168 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 BROXQ5VW32 411 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 NIPAL1Q6NVV3 410 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 SLC36A4Q6YBV0 504 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 MED25Q71SY5 747 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 C6orf120Q7Z4R8 191 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ADCK2Q7Z695 626 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 VTCN1Q7Z7D3 282 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TRIM48Q8IWZ4 208 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 UBALD2Q8IYN6 164 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 LGI4Q8N135 537 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CARFQ8N187 725 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PARP8Q8N3A8 854 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 FAM26EQ8N5C1 309 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 HORMAD2Q8N7B1 307 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PIK3C3Q8NEB9 887 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TSPAN14Q8NG11 270 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 OR8K5Q8NH50 307 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 NFKBIDQ8NI38 313 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 SLC38A5Q8WUX1 472 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 RASSF5Q8WWW0 418 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 DNASE2BQ8WZ79 361 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 HDAC2Q92769 488 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 HOXB13Q92826 284 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 MAL2Q969L2 176 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CNRIP1Q96F85 164 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 FBXL20Q96IG2 436 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CNDP2Q96KP4 475 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ZNF300Q96RE9 604 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 LRRC61Q9BV99 259 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 BTBD2Q9BX70 525 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 GPR174Q9BXC1 333 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 GABARAPL3Q9BY60 117 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 AMBRA1Q9C0C7 1298 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TCEAL2Q9H3H9 227 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 SERHL2Q9H4I8 314 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 CXorf56Q9H5V9 222 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 IL21RQ9HBE5 538 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 SEMA5BQ9P283 1151 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 EPHA6Q9UF33 1036 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ACAD8Q9UKU7 415 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 BAG5Q9UL15 447 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 PSME2Q9UL46 239 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 NDRG4Q9ULP0 352 aaKnown RBP5.2□□□□□ -1.58
ATG4A-208ENST00000489247 LYVE1Q9Y5Y7 322 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ENPP4Q9Y6X5 453 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 V9GYQ6 96 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 ANKRD12Q6UB98 2062 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 XIRP2A4UGR9 3374 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 DSPPQ9NZW4 1301 aa5.2□□□□□ -1.58
ATG4A-208ENST00000489247 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 A0A087WV62 115 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 LOC100130705A0A1B0GUX0 176 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 OR6C74A6NCV1 312 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 TRIM64BA6NI03 449 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 WASHC1A8K0Z3 465 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 LMO7DNF2Z398 122 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 K7ESF4 209 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 M0QX08 132 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 ACOT7O00154 380 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 TLR4O00206 839 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 SYT5O00445 386 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 GNGT2O14610 69 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 PGRMC2O15173 223 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 P2RX6O15547 441 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 EMC8O43402 210 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 GALR3O60755 368 aaPredicted RBP5.19□□□□□ -1.58
ATG4A-208ENST00000489247 MRPS14O60783 128 aaKnown RBP5.19□□□□□ -1.58
ATG4A-208ENST00000489247 UGT2B11O75310 529 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 E2F6O75461 281 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 CPNE6O95741 557 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 AGR2O95994 175 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
ATG4A-208ENST00000489247 CCDC159P0C7I6 412 aa5.19□□□□□ -1.58
ATG4A-208ENST00000489247 ALOX12P18054 663 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms